Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1037 ATGGGGAATGACAAGCCATATGGGGATATTCCAGGGCCTGATAGTGACATAAGTTTTGTAAGCTCTAGAAGATCAAGCACAGATCGGATGCTCCCTTCATTGTTCAACAACAACAACTTAGAGATGGGAATGTCGATCCCCCGGCTATCATATAGCTCCGACACAGATGGAAATAATTATAGCTTTGAGTCTACGCATTTTGGAACGAGGTCTATGGATATCAGCTCTGATTTCTCATCCTTCTCACAAGATAGTGAGAGCTTTTCAGCTGCAACACAGGGCGTGGATGATGTGGAGGCTGAAATGAGAAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTATAGCAATGCCTGCAAAGAAGCACTCACAGCGCAGCAAAAGGCTGTGGAACTCCAGCGCTGGAAATTAGAGGAAGAGAGGAGACTCGAGGAGGCAAGGCTTGCGGAAGAAGCCGCATTGGCGATAGCAGAAAGGGAGAAGGCAAGATCGAAAGCAGCCATAGAGAGTGCTGAGGTACAGCAGAGGATTGCAGAGCTGGAATCACAGAAGAGAATCACTGCAGAAATGAAAGCATTTAAAGAAATAGAAGAGAAGAGAAAAGAAATGGATGCCTTATCAAACACTCATGTGAGGTATAGAAGGTACACAATTGAGGAGATTGAAGCTGCAACGAATTCCTTTAGTGAGTCACAGAAGATTGGAGAAGGAGGCTATGGTCCTGTTTACAAGTGCCTTCTGGACCATACACGTGTCGCGGTGAAGGTTCTTCGTCCTGACGCAGCACAAGGAAGGTCACAGTTCCAAAGAGAGCACATGGGGAACGGAAGCCTAGACGACTGCCTCTTCAACCAGGGAAACCGTCCCCCGATTCCCTGGCAACTGAGGTTCAAAATTGCAGCCGAAATTGGCACCGGCCTGCTGTTCCTCCACCAGACAAAACCCGAACCACTAGTCCACCGAGACCTCAAGCCAGCCAACATCCTGCTGGACAGAAACTACGTCGCTAAGATCAGCGACGTAGGCCTGGCGAGGCTGGTTCCGCCCTCGGTGGCCGACAACGTGACACAGTACAGGATGACATCCGCAGCCGGGACATTCTGCTACATAGACCCTGAGTACCAGCAGACAGGGATGCTTGGAGTGAAGTCAGATATATACTCTCTTGGGATCATTTTCTTGCAAATTTTGACAGCAAAGCCTCCAATGGGATTGACACACCGTGTTGGGAGCGCTATTAATAATAACAAATTTGCTAATATGTTGGATCCAAATGTGTCTGATTGGCCACTGGAGGATGCATTGAGCTTGGCAAAGATTGGAATAAAGTGTGCTGAGCTGAGGAGGAGAGACAGACCTGATCTTGGGAAGGAAGTTATGCCTGAACTGAATAGGCTAAGAGACCTTGTTGATACCAATGATCATTTTTCTACGTTTAGTGGCTATGCTAGCCCTTCCAATCAGAGCCAAGTTTCTCTTCAGATGGATGGAAGCAGTTCTCCACTTCCCTATTCTGGGGAGAGCATAAGAAACACATCAGGTCCTGTTTGA 1554 0.4762 MGNDKPYGDIPGPDSDISFVSSRRSSTDRMLPSLFNNNNLEMGMSIPRLSYSSDTDGNNYSFESTHFGTRSMDISSDFSSFSQDSESFSAATQGVDDVEAEMRRLKLELKQTMEMYSNACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEREKARSKAAIESAEVQQRIAELESQKRITAEMKAFKEIEEKRKEMDALSNTHVRYRRYTIEEIEAATNSFSESQKIGEGGYGPVYKCLLDHTRVAVKVLRPDAAQGRSQFQREHMGNGSLDDCLFNQGNRPPIPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKPPMGLTHRVGSAINNNKFANMLDPNVSDWPLEDALSLAKIGIKCAELRRRDRPDLGKEVMPELNRLRDLVDTNDHFSTFSGYASPSNQSQVSLQMDGSSSPLPYSGESIRNTSGPV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1037 517 Gene3D Phosphorylase Kinase; domain 1 179 276 - -
Aed6g1037 517 Gene3D Transferase(Phosphotransferase) domain 1 277 481 - -
Aed6g1037 517 MobiDBLite consensus disorder prediction 481 517 - -
Aed6g1037 517 SMART serkin_6 229 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1037 517 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 272 511 - -
Aed6g1037 517 PANTHER OS02G0152300 PROTEIN 2 272 - -
Aed6g1037 517 ProSiteProfiles Protein kinase domain profile. 144 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1037 517 SUPERFAMILY Protein kinase-like (PK-like) 214 473 IPR011009 -
Aed6g1037 517 Pfam Protein kinase domain 271 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1037 517 Coils Coil 95 184 - -
Aed6g1037 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Aed6g1037 517 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 2 272 - -
Aed6g1037 517 PANTHER OS02G0152300 PROTEIN 272 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1037 Aed-Chr6 14682163 14691751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1037 5 494 Receptor kinase-like Gene Family AT1G78940 57.009 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aed6g1037 Pkinase 2.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1037 - - gmx:100787522 778.859