Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1036 ATGGCTCATGAAAGAGCATACTATTGCCTTCCTATGCTCTTGTTATTGGCCTTATGTAATCTTGTGCCATCATTGGGAGACACAGAAGCTCAAATTTTGATGAGGTTCAAAGCTTCATTGTCCAATAACAATGCCTTAGACAACTGGGTCAACGAGTCTAGTTTATGTAGTTGGAGAGGCATGTTATGCAATCACACTGACCAAACATTCTATGGCTTGAGACTAGAGAACATGAGTCTTGGTGGGAAAATTGATGTTGACACCTTGTTGGAGTTGCCAACTTTGACAAGCTTTAGTGTCAAGAACAACACGTTTGAGGGGCCAATGCCTGAGTTCAAAAAGCTTGTGAGGCTGAGGGCATTGTTTCTGTCCCATAACAAGTTCAATGGTGATGTTCCTGATGATGCTTTTGAGGGCATGACAAGGCTCAAAAAGGTGTTCTTGGCACAAAATGGCTTCACAGGTCATATTCCTAAGTCACTTACTAACTTGCCTAGACTTTGGGATTTGGACTTGAGTGGGAATAGCTTTGGAGGAAACATACCTGAGTTTCAACAAAAGGGTTTCAGAATGTTTAATTTATCGCATAATCAGTTGGAAGGCAACAGAGGCCTATGTGGAAAACCTATGAGTTCCTGCAATGAGATTGGCAGCAATGACTCTAATAAATCAGAGGTTCCTGACCCTCCTTCATCTGAAAGAAAGGGAAAGAAACACAAAATCCTTATAACTGTCATCATAGTGGCGGCAGTGGTTGTTGTTGCTTCAATGTTAGCACTTCTATTTATCCGCAACCACAGAAGAAAAAGGTTGCAACCTATAATACCAAGCAAGAAGGGGGAAAATTCCAAGAACAGTGCAGGCTTCAAGGAATCATCACAATCACTTGATCATATGACAAGTGATTTCAAGAACGGTGGCGACGGCGAATTGAACTTTGTTAGGGAAGACAAAGGGGGGTTTGATTTGCAGGAACTGCTTAGAGCCTCAGCTGCGGTTCTTGGCAGTGGCAGTTTCGGGTCGACCTACAAGGCCATGATTAATTTGAATGGACCAACTGTGGTTGTGAAGAGGTTTAGGCACATGAACAATCTTGGAAAGAGGGAGTTCATTGAGCACATGCAAAGGCTTGGAAGTAGAAGTGACTCTGTGCTAACCTGGTCAAGCCGTTTGAAGATCATAAAAGGAGTGGCAAGAGGCTTAGGCCACCTCTACGAAAACTTCCCAAACCAAAACCTACCACATGGCCATCTCAAGTCCTCCAATGTGGTCTTGGACTATTCATTTGAGCCACAACTGACGGAGTACGGCCTCGTGGCAGCGGTGAGCAAGAGCCACGCTCAGCGCTTCATGGCGGCCTACAAGGCGCCAGAGGTGAGCCAGTTTGGGCGGCCGAATGTGAAGAGTGACGTGTGGTGTCTGGGGATCCTCATTCTGGAGCTTCTAACAGGGAAGTTCCCAGCAAACTATCTAAGGCATGGGAATAAGGGTGGCAACAATGGTGACTTGGCAAAATGGGTGGACTCAGTGGTGAGGGAAGAGTGGACTGGTGAGGTGTTTGACAAGGGCATGTTGGGGAGAAGGAATGGGGAGGGTGAGATGCTGAAGCTGCTGAGGATTGGGATGTTTTGCTGCAAATGGGGTGTGGAGAGTAGGTGGGATTGGAGGGAGGCATTGGCTAGGATTGAGGAGTTGAAGGAGAGGGACAGTGATCATGAGGATTACTCTTCTAATGTCAGTGATGGAGATTTGAACTACTCAAGGACTACTGTGACTGAAGATGAGTTCTCTTTCTCTGTCACTAATTGA 1809 0.4577 MAHERAYYCLPMLLLLALCNLVPSLGDTEAQILMRFKASLSNNNALDNWVNESSLCSWRGMLCNHTDQTFYGLRLENMSLGGKIDVDTLLELPTLTSFSVKNNTFEGPMPEFKKLVRLRALFLSHNKFNGDVPDDAFEGMTRLKKVFLAQNGFTGHIPKSLTNLPRLWDLDLSGNSFGGNIPEFQQKGFRMFNLSHNQLEGNRGLCGKPMSSCNEIGSNDSNKSEVPDPPSSERKGKKHKILITVIIVAAVVVVASMLALLFIRNHRRKRLQPIIPSKKGENSKNSAGFKESSQSLDHMTSDFKNGGDGELNFVREDKGGFDLQELLRASAAVLGSGSFGSTYKAMINLNGPTVVVKRFRHMNNLGKREFIEHMQRLGSRSDSVLTWSSRLKIIKGVARGLGHLYENFPNQNLPHGHLKSSNVVLDYSFEPQLTEYGLVAAVSKSHAQRFMAAYKAPEVSQFGRPNVKSDVWCLGILILELLTGKFPANYLRHGNKGGNNGDLAKWVDSVVREEWTGEVFDKGMLGRRNGEGEMLKLLRIGMFCCKWGVESRWDWREALARIEELKERDSDHEDYSSNVSDGDLNYSRTTVTEDEFSFSVTN 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1036 602 Pfam Leucine rich repeat 131 176 IPR001611 GO:0005515
Aed6g1036 602 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 380 - -
Aed6g1036 602 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 382 576 - -
Aed6g1036 602 MobiDBLite consensus disorder prediction 274 300 - -
Aed6g1036 602 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Aed6g1036 602 SMART serkin_6 328 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1036 602 Gene3D Transferase(Phosphotransferase) domain 1 371 587 - -
Aed6g1036 602 MobiDBLite consensus disorder prediction 212 226 - -
Aed6g1036 602 Gene3D Ribonuclease Inhibitor 26 225 IPR032675 -
Aed6g1036 602 SUPERFAMILY L domain-like 53 202 - -
Aed6g1036 602 MobiDBLite consensus disorder prediction 210 235 - -
Aed6g1036 602 ProSiteProfiles Protein kinase domain profile. 297 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1036 602 PANTHER LRR RECEPTOR-LIKE KINASE 10 380 - -
Aed6g1036 602 PANTHER LRR RECEPTOR-LIKE KINASE 382 576 - -
Aed6g1036 602 MobiDBLite consensus disorder prediction 278 300 - -
Aed6g1036 602 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Aed6g1036 602 SUPERFAMILY Protein kinase-like (PK-like) 333 566 IPR011009 -
Aed6g1036 602 Pfam Protein kinase domain 385 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1036 Aed-Chr6 14658806 14662530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1036 6 583 Receptor kinase-like Gene Family AT5G35390 40.611 8.77e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed6g1036 Pkinase 2.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1036 - - gmx:100781593 957.592