Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1026 ATGGGAACTTTATTATTTTCTTCTATATATACCCATCAAACAGCTTCTCTTATTCCCTTTTCTCTCTTCCTCCCCTCTTTCCAATTTTCCGGTGACATGGAGTCAAAATGGGGTGGCGCCGCCAGCATCATGCCAGCAAACTTCGACGACTTCAAGTGGTTCGCCTCCATATTCGATTCTGCAAACGACGACGACGTCAAACCCTGCAAGCCTGAGCCATTCTCCGACGCAGCTTTCCAAAACCGGTTGGGAGTCCCGTGTCTGCTAACAAACCAAACGAAGGTTTCTAATCGAGAGTCTGCAAGGAGGTCCAGAAGAAGAAAACAAGCACATTTGGCTGACCTGGAGTGGCAAGTTGAACAGCTGAGACTGGACAATGCAAACCTATTTAAGAAGCTTACAGATGCCAGCCAACAATTTCGCGAGGCTGATACAAATAATCGAGTGCTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAAGATATGGTCACTCGTGGCACCCTCACACCTACTTTCAACCACCAGATCAACCTTCTTCAAAATGATCAGATTCCATTACCTCAACTCAACAACACGAATAATAGTAATAATAATCTGCATCGTATGGCACATGTCTCGCCAAGCATCACAGTTAATGGGAATGATGCTGCTTCTTCATATGGTGGTGGAATCACAGTAATTAGTGGACAAAATTCATCAATGCTTGGAAACTTGGATAATATTCCTTGCAACGATTTCAGTAGCGATAATAATAATAATGCTGTGAGTTCTATCACTACCATGTGGTCTTAA 807 0.4325 MGTLLFSSIYTHQTASLIPFSLFLPSFQFSGDMESKWGGAASIMPANFDDFKWFASIFDSANDDDVKPCKPEPFSDAAFQNRLGVPCLLTNQTKVSNRESARRSRRRKQAHLADLEWQVEQLRLDNANLFKKLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMVTRGTLTPTFNHQINLLQNDQIPLPQLNNTNNSNNNLHRMAHVSPSITVNGNDAASSYGGGITVISGQNSSMLGNLDNIPCNDFSSDNNNNAVSSITTMWS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1026 268 PANTHER BASIC LEUCINE ZIPPER 9 94 268 - -
Aed6g1026 268 PANTHER BASIC LEUCINE ZIPPER 63 94 268 - -
Aed6g1026 268 Coils Coil 105 139 - -
Aed6g1026 268 SUPERFAMILY Leucine zipper domain 93 139 IPR046347 GO:0003700|GO:0006355
Aed6g1026 268 Gene3D - 91 145 - -
Aed6g1026 268 SMART brlzneu 89 149 IPR004827 GO:0003700|GO:0006355
Aed6g1026 268 Coils Coil 147 167 - -
Aed6g1026 268 Pfam bZIP transcription factor 94 137 IPR004827 GO:0003700|GO:0006355
Aed6g1026 268 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 107 IPR004827 GO:0003700|GO:0006355
Aed6g1026 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 94 150 IPR004827 GO:0003700|GO:0006355
Aed6g1026 268 CDD bZIP_plant_GBF1 103 141 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1026 Aed-Chr6 14414630 14422610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1026 96 267 bZIP Transcription Factor Family AT5G24800 49.711 1.33e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed6g1026 bZIP_1 2.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1026 K25784 - gmx:778193 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2363 7 25674065 25679011 Aed6g1026 6 14414630 14422610 PCT