Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0992 ATGGCAAATGATTGCAACATCACCTCTAACTATACTTTCAAGAACCATTTGCTTGTGTTCATCATCACCATGATGATGATGGTTCTTTCTTTCATTTCCAATGTTCAAGCCCAAGACAGTGACACAGATTCTTCCATGCCTGCAGTAGATTTTCCTGAACCTGTTCATCCAAGCAAGGTGGTTGTGATAGCTTCCCTTTCAATAATGTTCACCATGTCATTCCTCATACTTGTGTACATAAGATTCCGCAGAAACAACCCTCTTGTACTCATCCAAAGAAGTAGCCATTACTCACCGAATTTTCAAGCATCAACAACAACTAGATCAAATTCAAGGTCAAGGGGGATAGAGAGACAAGTGGTTGAGGCACTCCCTGAGATGCTTCATGACATGTCAAGCAGAAGATTCTCTCCCTCTATTTTCAATGAGGAGCGTGATGAAAGTTCATTTACTACTTCACTATTGAATACTGCTGAGAAGAGATCTATGTCTGAGATTGCTCGTGTTCCTAGGTTCATAGAAACGTGCAAGCAGAATAGAATTGAAGCAAGTGGGATCATCAACGAGAGGGAAGAGAGGTTGAGGAGGATTTGGTTGGGAATTGCTCAACGAACAGTGCAATGGTTTGTGGGACAAGAAAGAAACTCGAGAGAATTAGAGCACAAACATTTAGCTCCAAATGTTTGA 687 0.4119 MANDCNITSNYTFKNHLLVFIITMMMMVLSFISNVQAQDSDTDSSMPAVDFPEPVHPSKVVVIASLSIMFTMSFLILVYIRFRRNNPLVLIQRSSHYSPNFQASTTTRSNSRSRGIERQVVEALPEMLHDMSSRRFSPSIFNEERDESSFTTSLLNTAEKRSMSEIARVPRFIETCKQNRIEASGIINEREERLRRIWLGIAQRTVQWFVGQERNSRELEHKHLAPNV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0992 228 PANTHER RING-H2 FINGER PROTEIN ATL4J 29 125 - -
Aed6g0992 228 PANTHER RING-H2 FINGER PROTEIN ATL4J 139 223 - -
Aed6g0992 228 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 29 125 - -
Aed6g0992 228 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 139 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0992 Aed-Chr6 13391927 13393211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0992 142 224 C3H Transcription Factor Family AT4G28890 34.783 2.11e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0992 K10664 - gmx:100803881 157.918