Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0983 ATGTTAATGAATAAATTGATGATGGATGGTGAGTATGATAGCGTCGACAAGGCTCTTGCCACCAAGGATGAAGGAAGCATTGCTCCTATTCCAAAGATGGTTCAAGTAGGAAGCTCATCGTTATACAAAATAGATAGAAAACTTGGCAAAGGAGGGTTCGAAGAAGTTAACGTTGATTGTTGGGTGGGTGTCGGTGCTGGAGCATTAGAGGTAGCATTGAAGTTTGAACACAAAACAGGTAAGGGTTGCAACTATGTACCACCTAATGAGTGGCAAGTTTACAATGCATTAGGTAGTAGCCAGTGTTCCACAAGTTCACTACAAGGGGCGACAAGGAGGATATGTCATGGTGATGTAAAGCCTGAGAACTTTTTGCTTGGCACCCCGGGAACTCCCGACGAGAAAAAGCTTTTTCTGGTTGATCTTGGATTAGCAACCCACTGGCGGATAGTTCGACTGATTAACGACCTAATGGGAACCATTCATTATGCTAGTGTGCATGCTCATCTTGGTAGAACATGTAGCAGGAGAGACGATTTGGAATCTTTTGCTTACACATTAATCTTCCTTCTTCGTGGCCAACTACCTTGGCAAGGATACCAGTTTGTGGAGTATGTTGTGAATTTGAAGTTTGATGAAGAGCCGAATTATGCAATGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGATTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTAGTCATTACGAAAAATGAATCATCCAAATATCATGAAGCTAAAGGAAGTTATACGAGAATGTGA 801 0.4145 MLMNKLMMDGEYDSVDKALATKDEGSIAPIPKMVQVGSSSLYKIDRKLGKGGFEEVNVDCWVGVGAGALEVALKFEHKTGKGCNYVPPNEWQVYNALGSSQCSTSSLQGATRRICHGDVKPENFLLGTPGTPDEKKLFLVDLGLATHWRIVRLINDLMGTIHYASVHAHLGRTCSRRDDLESFAYTLIFLLRGQLPWQGYQFVEYVVNLKFDEEPNYAMYKLIKEVGDGTFGIVWRAINKQSGEVVVITKNESSKYHEAKGSYTRM 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0983 266 Gene3D Transferase(Phosphotransferase) domain 1 110 217 - -
Aed6g0983 266 PANTHER - 18 101 - -
Aed6g0983 266 SUPERFAMILY Protein kinase-like (PK-like) 218 253 IPR011009 -
Aed6g0983 266 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0983 266 PANTHER - 114 201 - -
Aed6g0983 266 PANTHER CASEIN KINASE-RELATED 114 201 - -
Aed6g0983 266 PANTHER - 201 224 - -
Aed6g0983 266 SUPERFAMILY Protein kinase-like (PK-like) 42 213 IPR011009 -
Aed6g0983 266 PANTHER CASEIN KINASE-RELATED 201 224 - -
Aed6g0983 266 PANTHER CASEIN KINASE-RELATED 18 101 - -
Aed6g0983 266 Gene3D Phosphorylase Kinase; domain 1 218 265 - -
Aed6g0983 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Aed6g0983 266 Pfam Fungal protein kinase 112 189 IPR040976 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0983 Aed-Chr6 13094178 13111217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0983 114 199 MAP Kinase Kinase Kinase AT5G50180 35.106 7.20e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Aed6g0983 Pkinase_fungal 1.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0983 - - lja:Lj1g3v2093240.1 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0058 10 393094 400457 Aed6g0983 6 13094178 13111217 PCT