Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0953 ATGGCCCACCTTGGAGCTAGTAGAACAACTAATGGATTTTCACCAAACCATGTTGAGATCCCTATCTATTCAAATGTCATTGTAGAGCTAAACCCAATACAAGAGGTTGCTGAGAGTAACAGCAATATTAACTACTCTCAAAGGACACCTGTCCTAGTTGCCGGTGCTTGTGGCATGACAATTGGAGAGTTTGTCTCTGTGTATACTAAGTATGACATAGAGATGATTCAGAGAGAGAGGGAAGCTAATAACAATAGAGGAGTGGATGGAGAAATTACTCATCAAAGGAAGAATCTTCCAAATCCATTTCAAGCTGCACTAGCATTAAGTGGGGTGCGAATGTCCAACTCTGGCTATAACATCACAGAGTACATATATACAACACCCGACATAAACCTCCCCAACTCTTGTTCTTCTTCATGTTCTGGTCGGTGGATTGGTTACGTGGCCGTGTCATCTCGATGA 465 0.4237 MAHLGASRTTNGFSPNHVEIPIYSNVIVELNPIQEVAESNSNINYSQRTPVLVAGACGMTIGEFVSVYTKYDIEMIQREREANNNRGVDGEITHQRKNLPNPFQAALALSGVRMSNSGYNITEYIYTTPDINLPNSCSSSCSGRWIGYVAVSSR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0953 154 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 52 108 - -
Aed6g0953 154 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 52 108 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0953 Aed-Chr6 12339995 12340550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0953 52 108 Nodulin-like Gene Family AT3G43660 49.123 1.81e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0953 K22736 - gmx:100790996 115.161