Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0932 ATGGAATATGGAAAATTGGGACCCTCCAACCCAGGTGGCTCCTCACGCCGCTCCACCACTCCTCTCAGTATCAATCCAACTTCTTCTTCCGCCAGCAGCAAAAAGAAGCTCATCATGCTTTCTCTCCTCGCCGCTGTCTTAATCGCGGTTGCTGCCATCTCCGCCATCCTGGTCACCGTCATCCGCTCGCATGCCATCAGCGGCCAAAACGGGCCGAACCTGGCCGGCAAGCCCACACAGGCAATTTCCCGAACCTGCAGCAAGACACGTTTCCCTACTCTATGCATCAATTCTCTCCTAGACTTCCCTGGCTCCACCGCTGCCTCAGAACAAGACCTCGTCCACATCTCCTTCAACATGACCCTGCGCCACGTAAGCCGAGCGTTCTACGCCTCCAGCGGCCTCTCGTTCACCGCCACGAACCCTAAGGCTCGTGCGGCTTACGACGATTGCCTTGAGCTATTGGAGGAGTCAATGGACGCGCTCTCACGGTCCCTCGACTCTGTCCTCACACCTTCGGCGTTATCCGACAACGGAGAGGTCAGACCCATCACTGTTGGATTCACGGAAGACGTGATGACGTGGCTCAGCGCCGCGCTCACTAATCAGGACACGTGTGCGGAGGGGCTCGAGGACACGAGCGGGAGCGTGAAGGACCAGATGGTTGATAACCTGAAGGACTTGTCTGAACTCGTGAGCAATTGTCTCGCGATATTCTCGGCGACTGGAAGCGGCGATTTCTCCGGGGTTCCGATACAGAACAAGAGACGGTTAATGGATAAGAAAGAAGAGGAAGAGGAGGAGAAATTAGTTAACCGCGATATTTCGGGGAAATTTCCTAGATGGTTGAATAAGCGAGATAGAAGATTGTTGAGTTTACCAGTGGGGACAATTCAGGCAGATATTACAGTGTCTAAGAACGGTAACGGAACAGTGAAGTCAATTGCCGAAGCGATTAAGAAAGCGCCGGAACATAGTACTCGCCGGTTCATCATTTACGTGAGGGCAGGAAGGTATGAGGAGAATAATTTGAAGGTGGGGAGAAAGAAAACGAATTTGATGTTCATAGGCGACGGGAAGGGTAAAACTGTCATCACAGGGAAAAAGAATGTGATAGATGGCATGACCACATTCCACTCTGCATCCTTTGCTGCTAGTGGTGCTGGATTCATTGCAAGAGACATTACGTTCGAGAACTATGCAGGACCGGCGAAGCACCAAGCAGTGGCGCTCCGTGTCGGAGCCGACCATGCGGTGGTGTACCAGTGTAACATTGTGGGGTATCAAGACTCATGCTATGTGCATTCTAACCGTCAATTTTTCCGTGAATGTAACATTTACGGTACCGTAGACTTCATATTTGGCAACGCCGCTGTGGTTTTCCAAAAGTGCAACATTTATGCTCGTAAGCCCATGGCCCAACAGAAGAACACCATCACGGCCCAGAATAGAAAAGACCCAAATCAGAATACGGGTATATCCATGCACAATTGTCGGATCCTACCCGCCCCGGATCTTGTCCCGGTTAAGGGCAGCTTCCCCACCTTTTTGGGCCGTCCATGGAAGCAGTACTCTAGAGTCGTTTACTTAGTATCCTACATGGGTGACCACGTACATTCTCGTGGATGGTTGGAGTGGAATGGAGACTTTGCTTTGAACACATTGTATTATGGTGAGTACATGAATTATGGGCCGGGTGCAGCTGTGGGTCATCGGGTTCAATGGCCCGGGTACCGGGTCATTACCTCTAATGTGGAGGCGAATCGGTTCACAGTGGCCCAATTTATATCCGGGTCTGCCTGGTTACCATCCACTGGAGTGGCCTTTGCTGCCGGATTATCTACATGA 1848 0.5157 MEYGKLGPSNPGGSSRRSTTPLSINPTSSSASSKKKLIMLSLLAAVLIAVAAISAILVTVIRSHAISGQNGPNLAGKPTQAISRTCSKTRFPTLCINSLLDFPGSTAASEQDLVHISFNMTLRHVSRAFYASSGLSFTATNPKARAAYDDCLELLEESMDALSRSLDSVLTPSALSDNGEVRPITVGFTEDVMTWLSAALTNQDTCAEGLEDTSGSVKDQMVDNLKDLSELVSNCLAIFSATGSGDFSGVPIQNKRRLMDKKEEEEEEKLVNRDISGKFPRWLNKRDRRLLSLPVGTIQADITVSKNGNGTVKSIAEAIKKAPEHSTRRFIIYVRAGRYEENNLKVGRKKTNLMFIGDGKGKTVITGKKNVIDGMTTFHSASFAASGAGFIARDITFENYAGPAKHQAVALRVGADHAVVYQCNIVGYQDSCYVHSNRQFFRECNIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISMHNCRILPAPDLVPVKGSFPTFLGRPWKQYSRVVYLVSYMGDHVHSRGWLEWNGDFALNTLYYGEYMNYGPGAAVGHRVQWPGYRVITSNVEANRFTVAQFISGSAWLPSTGVAFAAGLST 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0932 615 Gene3D - 295 613 IPR012334 -
Aed6g0932 615 MobiDBLite consensus disorder prediction 1 30 - -
Aed6g0932 615 Pfam Plant invertase/pectin methylesterase inhibitor 81 238 IPR006501 GO:0004857
Aed6g0932 615 CDD PMEI-like_3 86 241 - -
Aed6g0932 615 PANTHER PECTINESTERASE 23 613 - -
Aed6g0932 615 Gene3D Invertase/pectin methylesterase inhibitor family protein 79 242 IPR035513 -
Aed6g0932 615 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 240 IPR035513 -
Aed6g0932 615 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 240 IPR006501 GO:0004857
Aed6g0932 615 ProSitePatterns Pectinesterase signature 2. 446 455 IPR033131 -
Aed6g0932 615 Pfam Pectinesterase 301 598 IPR000070 GO:0030599|GO:0042545
Aed6g0932 615 PANTHER PECTINESTERASE 23 613 - -
Aed6g0932 615 MobiDBLite consensus disorder prediction 11 30 - -
Aed6g0932 615 SUPERFAMILY Pectin lyase-like 298 612 IPR011050 -
Aed6g0932 615 SMART PMEI_2 77 238 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0932 Aed-Chr6 11016653 11021376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0932 1 614 Carbohydrate Esterase AT5G53370 62.723 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0932 - - gmx:106796002 1056.2