Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0924 ATGCACCGTTGGAAACGGTTGATACCCACCTTTACTTCAATCAGTTCCAGAATTGAATCTTTAACTGACAGGAGATTTACTCATGGCCATCTAGCGCAGTTGAAATTCATCTTGCTTGAGGCTATTGTTCTCAAGAAGCATCTAGTGCTTGATGAACGGACAAGGTGTAGGAAGCTGGATATTCACATTTCTCTGGACCCTACGGCGGTGGAGGCTGATGCGAATTTGCCCCCTCAACGAGGGAGAGTGTCACTGAAGAAGGTGTTCTGGGCACGGCTAAAGGAATTTTTGGAATCTCATCCTGAGGGTGATGAAATTCCAGAAGGTGAATTGCTTGAGCCATTCAATCACCAAGAGAATGAAAGTATTTCGGATAATGCTGGTGGCTTACCCATAGATGATTATATTTTTGACGTCCTCCAAGAAAATCTTATACAATGGATTAAAGAAAAGGAAAGAATGGCAATGGAGGAAAGAGACCCAGCTATCACACAAGCAAAGAAACGAATGAAAAATATAGCTAGCCTCCCTAAGCTCTTTGACATGATTTGTGGCTTGCTTCAACAGCGGAATTGTATCACTAAAGTGGAGCTTATAAGAAAGATAATCTCAAGTTGCTGTGATATTGTTGACAGAAGTGTAGTTGAAGAACAGCTTAGTTTGTTGCAAGAACTAGCACCAGAATGGATTTCTGAGAAGCAGATCTCTAGTGGGGATTTCCTATTGTTCATAAATAAAATGTTGATCCCTCAAGCCATTCGAGCATCTCTTGAAGAAGCAACATAG 786 0.4148 MHRWKRLIPTFTSISSRIESLTDRRFTHGHLAQLKFILLEAIVLKKHLVLDERTRCRKLDIHISLDPTAVEADANLPPQRGRVSLKKVFWARLKEFLESHPEGDEIPEGELLEPFNHQENESISDNAGGLPIDDYIFDVLQENLIQWIKEKERMAMEERDPAITQAKKRMKNIASLPKLFDMICGLLQQRNCITKVELIRKIISSCCDIVDRSVVEEQLSLLQELAPEWISEKQISSGDFLLFINKMLIPQAIRASLEEAT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0924 261 PANTHER DNA REPLICATION FACTOR CDT1 1 125 IPR045173 GO:0003677|GO:0030174|GO:0071163
Aed6g0924 261 PANTHER DNA REPLICATION FACTOR CDT1 134 261 IPR045173 GO:0003677|GO:0030174|GO:0071163
Aed6g0924 261 Gene3D - 136 261 IPR038090 -
Aed6g0924 261 CDD Cdt1_c 144 258 IPR032054 -
Aed6g0924 261 Pfam DNA replication factor Cdt1 C-terminal domain 144 235 IPR032054 -
Aed6g0924 261 SUPERFAMILY "Winged helix" DNA-binding domain 1 115 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0924 Aed-Chr6 10504926 10506817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0924 116 259 Core DNA Replication Machinery Family AT2G31270 48.718 3.31e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0924 K10727 - gmx:100778818 195.667