Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0906 ATGGGAGAGAGTTATGGAGGTCACTATGTACCTCAACTTGCTGAACTCATTATTAAGAGTAAAGTGAATTTCAACCTAAAGGGAATAGCACTAGGAAACCCTCTTCTGGATTTCGACACTGATATGAGCGCAGTTGATGAGTATTACTGGTCTCATGGAATTATATCTGATTATGCATACACAATCAGTACCTCTCTATGTAACTTGTCTAGAGCATTAATAGAATACTTCAGTGGCCATCTTTCCAACGATTGTCTTTTCAAAAAGTCAGAAGAATATTCTTATACAACTTCCATTGATCCATATTATGTTGTTGGGGACAAATGTCTTTCTTACAATGTTTCTCAGGCAGTTTCAGCTATAGATGTACTTGAACAGGAAAGATGTGCAGAAAGCTCTCCATGCTCGGTTGGTGGGAACCACCAATTAGCATTTGTGCAGCAAGCAGACACACGGATTGTACAAACAAATTATGACCCATTGAACAAAGAGATACCAACAATTAATGTTGTCGGCTTCCTTTGCCATAGTGGGGATCAAGATTCTGTGATTCCATTCATGGGCACGAGGAGATTGGTTGGAGGATGGACACAGGTTTATGGTAATCACCTCACCTACGCCACAGTAAGAGGAGCTTCACATGCCACTCCAATTATTCAACCAAAGAGATCTTTTGTTTTGTTTAATGCGTTTCTTCAAGGGAAATCACTCCCTAAACCATATGCTTAG 729 0.3992 MGESYGGHYVPQLAELIIKSKVNFNLKGIALGNPLLDFDTDMSAVDEYYWSHGIISDYAYTISTSLCNLSRALIEYFSGHLSNDCLFKKSEEYSYTTSIDPYYVVGDKCLSYNVSQAVSAIDVLEQERCAESSPCSVGGNHQLAFVQQADTRIVQTNYDPLNKEIPTINVVGFLCHSGDQDSVIPFMGTRRLVGGWTQVYGNHLTYATVRGASHATPIIQPKRSFVLFNAFLQGKSLPKPYA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0906 242 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 1 125 IPR001563 GO:0004185|GO:0006508
Aed6g0906 242 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 193 238 IPR001563 GO:0004185|GO:0006508
Aed6g0906 242 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 153 193 IPR001563 GO:0004185|GO:0006508
Aed6g0906 242 Pfam Serine carboxypeptidase 1 129 IPR001563 GO:0004185|GO:0006508
Aed6g0906 242 Pfam Serine carboxypeptidase 193 234 IPR001563 GO:0004185|GO:0006508
Aed6g0906 242 SUPERFAMILY alpha/beta-Hydrolases 1 237 IPR029058 -
Aed6g0906 242 Gene3D alpha/beta hydrolase 1 237 IPR029058 -
Aed6g0906 242 PANTHER CARBOXYPEPTIDASE 1 125 - -
Aed6g0906 242 PANTHER CARBOXYPEPTIDASE 193 238 - -
Aed6g0906 242 PANTHER CARBOXYPEPTIDASE 153 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0906 Aed-Chr6 9933275 9936605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0906 167 237 Calmodulin-binding Proteins AT2G22960 31.868 1.49e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0906 K16297 - gmx:100819443 325.479