Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0905 ATGGTACCTCAGACATTTACTATGATTGCGACAATAGTCTTTGTTCTTGCACAAACACTTGTGGTGGTGAATTCACTTCCTGAAGCTGATAAAATAACCAATTTGCCAGGGCAGCCACAGGTTAATTTTCAGCAATATTCTGGTTACGTTACTGTGGATGATAAACATCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTTCTTCCAAGCCATTAGTCCTCTGGTTGAATGGAGGGCCTGGTTGTTCATCGGTTGGAGTTGGAGCTTTTTCTGAGCATGGTCCTTTCAGACCAAGTGACAACAATGTTCTTGAGAAAAATTATTATAGTTGGAACAAAGTGGCAAATGTGCTATACTTGGAGTCACCAGCTGGTGTTGGATTCTCTTACTCTAACAATAAATCTTTCTATGCCTTAGTGACAGATGAGATTACAGCTAGGGATAGTCTTGTTTTCCTACAGCGTTGGTTCACTGAATTCCCTGAGTACTCAAACAACGAGTTCTTCATCACAGGGGAGAGCTATGGAGGTCACTATGTTCCACAACTTGCACAACTTATTGTTCAAACCAAGACCAACTTCAATCTCAAGGGAATAGCAATAGGGAATCCTCTTCTCGAATTTAATACTGATTTCAACTCAAGATCTGATTACTTTTGGTCTCATGGACTTATATCAGATTCAACATACGAAGTCTTAACTAAAGCATGCAACTATTCCTCAATTAGGAGAGAAATTCAAAATGGGAATCTTAGAGGGGTTTGTGAAAAAGCAAGTAAGCTATTGGAAACTGAGATTAGCAACAATGTAGATGAATATGATGTCACTATCGATGTTTGTTTGTCATCAGTAAATCAACAGGCCTATGTGCTGAATAAACTGCAAGAGACACAGAAGATAGATGTTTGTATTGGAGATAAAACAATCACATACTTGAACAGAAAAGAAGTCCAAGAAGCTTTGCATGCTAAACTTGTTGAAGTCACAAAATGGTCAACTTGCAGCCCAATTCTGCATTATGACTATCAGAATCTAGAAATACCAACAATTCCTATTCTAGGGTCACTTGTTAAGTCTGGCATCAAGGTTCTAGTATACAGTGGAGATCAAGATTCAGTGCTTCCATTAATAGGTTCGCGATCTCTAGTGTACAAATTAGCCAAGGAAATTGGACTAGATACAACAGTGGCCTATAGAACTTGGTTTGAGAAAAAACAGGTAGCAGGGTGGACACAAGTATATGGGGACGTCTTATCATATGCCACTATAAGAGGAGCATCTCATGAAGCTCCATTTTCTCAACCGCAGAGATCACTGGTGTTACTTAAAGCATTTCTGGAAGGAAAACCACTACCTGCTGTTGTGTAA 1380 0.3913 MVPQTFTMIATIVFVLAQTLVVVNSLPEADKITNLPGQPQVNFQQYSGYVTVDDKHQRALFYYFVEAEEDPSSKPLVLWLNGGPGCSSVGVGAFSEHGPFRPSDNNVLEKNYYSWNKVANVLYLESPAGVGFSYSNNKSFYALVTDEITARDSLVFLQRWFTEFPEYSNNEFFITGESYGGHYVPQLAQLIVQTKTNFNLKGIAIGNPLLEFNTDFNSRSDYFWSHGLISDSTYEVLTKACNYSSIRREIQNGNLRGVCEKASKLLETEISNNVDEYDVTIDVCLSSVNQQAYVLNKLQETQKIDVCIGDKTITYLNRKEVQEALHAKLVEVTKWSTCSPILHYDYQNLEIPTIPILGSLVKSGIKVLVYSGDQDSVLPLIGSRSLVYKLAKEIGLDTTVAYRTWFEKKQVAGWTQVYGDVLSYATIRGASHEAPFSQPQRSLVLLKAFLEGKPLPAVV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0905 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 457 IPR001563 GO:0004185|GO:0006508
Aed6g0905 459 PANTHER CARBOXYPEPTIDASE 6 457 - -
Aed6g0905 459 SUPERFAMILY alpha/beta-Hydrolases 32 456 IPR029058 -
Aed6g0905 459 Pfam Serine carboxypeptidase 36 452 IPR001563 GO:0004185|GO:0006508
Aed6g0905 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Aed6g0905 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Aed6g0905 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Aed6g0905 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Aed6g0905 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Aed6g0905 459 Gene3D alpha/beta hydrolase 25 456 IPR029058 -
Aed6g0905 459 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0905 Aed-Chr6 9900068 9902652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0905 315 455 Calmodulin-binding Proteins AT2G22960 31.206 3.77e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0905 K16297 - gmx:100799900 831.632