Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0880 ATGTGCAAAGTGAATGAAACATTCAAGAATAGCACCATTAAAGTTTGTGATGTGTTGCCAAATTTGAAGGAGATGAACATTGACTCCTGTGATATAGTGGAATTGCCACTTGGACTGTCTATCACAAACTGCAACAAGCTTTCTAAACTTCCTAAAGGAATGGAGAAGTTGGTCAATTTGGAGTCACTAAGGCTTATTTCATGTTCTAATTTAAAAGAGTTGCCAGACTCAATCAAAACCCTTCATAAACTGAAACATCTTGACATCTCCCACTGTGTAAATCTTAATTCTTCAATGAATATGAGGGAGATGCCTAGTGTAGAAAACTTCGATTACAAAGGTTGTACAAGTTTGATAGGTGTGTGTTCGCCCCCTGAACCCCCTACTTTCACTATTGGGTTGGATGTTCCCATGAGGGAGTTGAAGCTGAAGTTGGTGAATGACCATCATAGTGTCTCGGTGCTCACGGTGACTGGACTAGGAGGTTCGGGGAAGTCAACGTTGGCCAAAATGTTTTGTTGGGATGAAGATGTCAAAGGTATGAAATCTCACCGACTCTATGTCTCGGCATGCCTCTCTTTTAGGAATTCGTAA 594 0.4091 MCKVNETFKNSTIKVCDVLPNLKEMNIDSCDIVELPLGLSITNCNKLSKLPKGMEKLVNLESLRLISCSNLKELPDSIKTLHKLKHLDISHCVNLNSSMNMREMPSVENFDYKGCTSLIGVCSPPEPPTFTIGLDVPMRELKLKLVNDHHSVSVLTVTGLGGSGKSTLAKMFCWDEDVKGMKSHRLYVSACLSFRNS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0880 197 Gene3D - 120 196 IPR027417 -
Aed6g0880 197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 189 IPR027417 -
Aed6g0880 197 SUPERFAMILY L domain-like 15 121 - -
Aed6g0880 197 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 118 IPR039203 GO:0050832
Aed6g0880 197 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 118 186 IPR039203 GO:0050832
Aed6g0880 197 Gene3D Ribonuclease Inhibitor 2 119 IPR032675 -
Aed6g0880 197 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 118 - -
Aed6g0880 197 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 118 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0880 Aed-Chr6 8972957 8973550 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0880 17 157 WRKY Transcription Factor Family AT5G45050 26.667 8.88e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0880 - - gmx:100812310 146.747