Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0879 ATGCCCGAATTTGAAAGTGACGATGAGACAGTTCATCAATTGGAACACTTGCTAAAATATATTGGGAATGATCCAATACTGTTGGTCCTGGATGATGTTCAGCCGGAATCAGTATCTCTTCTTGATAAATTTGTGTTCCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATCCACAATTAAAGGATTTGGTGAGTCATACGAGTTGAAACCACTTAATGAAGACGATGCTATATATTTATTTCTCCACTCAGCATCCCTCAATCAGAACAGCTCTAGCATTCCTTCTAATGTTGTCGAAAAGAATGAGTATCACATTGCAGCCCACACACTATCCATATCAACCGATGAAGCATTCACTTCAGAATGGTGCAACTTGCAACCAACTGAGGTTGAGGTTCTAGTGTTGAACCTTCGAGAAAAGAAGCATTCACTACCAATGTTCATAAAGAGAATGAATAAATTAAAAGTCCTAATAATAACGAATTATGACTTGCGTTGTGCTGACTTGGAGAATTTCGAGGTGCTTGATTATCTGTCTAATCTCAAAAGAATCAGATTAGAGAAGGTTTCAATTCCTTTTCTAAGCAAGACTGGAGTGCAATTGAAGAATCTGCACAAGTTCTCTTTCTTTATGTGCAATGTGTATGAAGCATTCAACAGTAGCACCATCGAAGTCTCTAATGTGTTGCCAAATTTAGAGGAGGTGAACATTGATTATTGTCAAGAGGCGGAATTGCCAGTTGGGCTTTTTGATATTGTTTCCCTAAAGAAGTTGAGTATCACAAACTGCCACAAGCTTTCTAAACTCCCTGAAGGAATTGAAAAGTTGGTCAATTTGGAATTGCTAAGGCTTACTTCATGTACTGATTTAGAAGAGTTGCCAGCCTCAATCACAAGTCTTCGTAAAATGAACTTTCTTGACATCTCTGACTGTATAAGTCTTGAAAAGTTACCAGAGAACATGGGGGAGTTGCGCAGTTTAGAAAGTCTCAACATCAAAGGTTGTTTTAGATTGATTGAATTACCATACTCATTCACAGAGCTTGAAGGTTTAAGGGTCGTGGTGTGTGATGAAGAGATGGCTGCATTGTTGGAGCCTTTCCAAACCATTCCTGGTTTAATGCTAGAGGTGGCCGAAGTTGATTTGAATTCAAATTGGCTTTTATAA 1173 0.3836 MPEFESDDETVHQLEHLLKYIGNDPILLVLDDVQPESVSLLDKFVFQIPNYKILVTSRSTIKGFGESYELKPLNEDDAIYLFLHSASLNQNSSSIPSNVVEKNEYHIAAHTLSISTDEAFTSEWCNLQPTEVEVLVLNLREKKHSLPMFIKRMNKLKVLIITNYDLRCADLENFEVLDYLSNLKRIRLEKVSIPFLSKTGVQLKNLHKFSFFMCNVYEAFNSSTIEVSNVLPNLEEVNIDYCQEAELPVGLFDIVSLKKLSITNCHKLSKLPEGIEKLVNLELLRLTSCTDLEELPASITSLRKMNFLDISDCISLEKLPENMGELRSLESLNIKGCFRLIELPYSFTELEGLRVVVCDEEMAALLEPFQTIPGLMLEVAEVDLNSNWLL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0879 390 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 102 - -
Aed6g0879 390 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 102 389 - -
Aed6g0879 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 89 IPR027417 -
Aed6g0879 390 Gene3D Ribonuclease Inhibitor 80 371 IPR032675 -
Aed6g0879 390 SUPERFAMILY L domain-like 120 358 - -
Aed6g0879 390 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 102 IPR039203 GO:0050832
Aed6g0879 390 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 102 389 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0879 Aed-Chr6 8963627 8965697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0879 237 354 WRKY Transcription Factor Family AT4G12020 30.508 4.12e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0879 - - gmx:100812310 449.899