Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0872 ATGGAAGAAGAGACTACTATTACCACTACACAGCGTGCTGCTTTTCTGCAAGAGAGATCGAAGACTATATCTTCGGAAATAGTGGAAAGCGGTCAAAGCAGTGAAACCAACAAGCAGATACTTGCCATTGGAGAAGGACCTATTAAGGGTTCTTTTGGTGTTCCTGAGAACCCTAAATTCACTGTTGGGTTGGATGAGCCGTTGAGTAAGTTGAAGATGGAGGTTCTTAGAGGTGGTGTGGCTGTTGTTCTGCTGACTGGTTTGGGTGGTTTGGGTAAATTTGGGGAAAATATTTTATTTGTCACTTTCTCCAAAACTCCCCAGTTGAAGATTATTGTGGAGAGATTATTTGAACACTGTGGATGTCAAGTGCCTGATTTTCAAAGTGATGAAGATGCAGTTAATCAATTGGGACTTCTGCTGAGGCAAATTGGTAGAAGTTCAATGTTGTTGGTTCTGGATGATGTTTGGCCTGGCTCAGAAGCTCTTGTCAAGAAATTTAGAGTCCAAATACCGGATTATAAGATTTTGGTGACTTCTAGGGTTGCATTTCCTAGTTTTGGTATCCAGTGTATCTTAAAACCACTTGTTCATGAAGATGCAGTAACCCTTTTCTGTCATTATGCTCTCCTGCAAGAAAGAAGTTCAAGTGTTCCAGACAAAGAACTTGTACAAAAGGCTGTTAGAATCTGCAAGGGTTTGCCACTTGCCATCAAAGTAATTGGGAGATCACTCAGTCATCAGCCTTCAGAGTTGTGGCTAAAGATGGTGGAGGAATTGTCACAGCACTCTATACTTGATTCTAATACTGAGCTACTTACATGCTTCCAAAAGATCTTGGATGTTTTGGAAGATGATCCTCTCATCAAGGAGTGCTTCATGGACCTTGGCTTGTTTCCTGAAGACCAAAGAATTGCTGTGACCGCTCTCGTTGATATGTGGGCAGAGGCGCATGGTCTAGATGACAATGGCACAGAGGCAATGACCATCATCAACAAATTAGACTCCATGAATCTGGCTAATATCTTGGTAGCAAGGAAAAATGCTAGTGACACAGACAATTACTACTACAATAACCACTTCATTGTCCTTCATGATCTTTTGAGAGAGTTTGCAATTTATCAAAGCACCTTGGAACCAATGGAAGAGAGAAAAAGATTCATTATTGAGATAAATCAAAATAAGCCTCATTGGTGGCTTGGGGAGAAGTCAAAATTTCTTAAGCCCCAACAGATCACTGCTCGCACATTGTCTATATCAACTGATGAAAATTGCACTTCAGATTGGCCCCAAATGCAACTAGATCAAGTTGAGGTTCTGATTTTTAATCTTCAAACTAAGCAGTATTCCTTTCCAGATTTCATTGAACAAATGAACAAACTTAAAGTTCTGATAGTCACAAATTACAGTTTCTATCCTTCTGAAATGAAAAACTTTGAGCTACTCGGTTCTTTATCCAACCTGAAAAGAATCAGACTAGAGCGGATTTCTGTTCCTTCCTTTGTCACAATGAAGAATCTTAAAAAGCTGTCCCTCTACTTCTGTAATATGAAACAGGCGTTTGAAAACAATGACATGTTAATTTCATATGCTTTTCCAAATCTTGAAGAGTTGAATATTGACTATAGCAAAGATATGGTAGGATTGCCTAAGGAACTTTGTGATATCATCTCCCTGAAGAAGCTAAGTATTACTAATTGCCACAAACTCACAGCACTGCTGCAAGAAATTGGAAAGTTGGAAAATTTGGAACTCCTCAGGCTCAGTTCCTGTACTGATTTGGAAGGGTTACCGGATTCTATTGGAAGACTTTCAAATCTACGACTTCTTGACATCTCAAATTGCATAAGCCTTCCTAATTTTCCGGAGGACTTTGGTAATCTGTCTAATCTACAAAGTCTCTACATGACAAGTTGTGCAAGGTGTGAGTTACCATTCTCAGTCACTAATCTTAAGAATTTAAAGGTGTTGGTATGCGATGAAGAGACAGCTGCTTCATGGGAAGATTTTAAACCTATGCTTCCCAATCTAAAGATAGATGTTCCTCAAGTTGATGTTAACTTGAATTGGCTTCAGACAATTTCCTCCTAA 2091 0.3936 MEEETTITTTQRAAFLQERSKTISSEIVESGQSSETNKQILAIGEGPIKGSFGVPENPKFTVGLDEPLSKLKMEVLRGGVAVVLLTGLGGLGKFGENILFVTFSKTPQLKIIVERLFEHCGCQVPDFQSDEDAVNQLGLLLRQIGRSSMLLVLDDVWPGSEALVKKFRVQIPDYKILVTSRVAFPSFGIQCILKPLVHEDAVTLFCHYALLQERSSSVPDKELVQKAVRICKGLPLAIKVIGRSLSHQPSELWLKMVEELSQHSILDSNTELLTCFQKILDVLEDDPLIKECFMDLGLFPEDQRIAVTALVDMWAEAHGLDDNGTEAMTIINKLDSMNLANILVARKNASDTDNYYYNNHFIVLHDLLREFAIYQSTLEPMEERKRFIIEINQNKPHWWLGEKSKFLKPQQITARTLSISTDENCTSDWPQMQLDQVEVLIFNLQTKQYSFPDFIEQMNKLKVLIVTNYSFYPSEMKNFELLGSLSNLKRIRLERISVPSFVTMKNLKKLSLYFCNMKQAFENNDMLISYAFPNLEELNIDYSKDMVGLPKELCDIISLKKLSITNCHKLTALLQEIGKLENLELLRLSSCTDLEGLPDSIGRLSNLRLLDISNCISLPNFPEDFGNLSNLQSLYMTSCARCELPFSVTNLKNLKVLVCDEETAASWEDFKPMLPNLKIDVPQVDVNLNWLQTISS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0872 696 Gene3D - 278 375 IPR036388 -
Aed6g0872 696 Gene3D - 94 184 IPR027417 -
Aed6g0872 696 Pfam NB-ARC domain 97 266 IPR002182 GO:0043531
Aed6g0872 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 296 IPR027417 -
Aed6g0872 696 SUPERFAMILY RNI-like 445 661 - -
Aed6g0872 696 Gene3D - 196 277 IPR042197 -
Aed6g0872 696 PRINTS Disease resistance protein signature 231 245 - -
Aed6g0872 696 PRINTS Disease resistance protein signature 82 97 - -
Aed6g0872 696 PRINTS Disease resistance protein signature 143 157 - -
Aed6g0872 696 PRINTS Disease resistance protein signature 602 618 - -
Aed6g0872 696 Gene3D Ribonuclease Inhibitor 377 676 IPR032675 -
Aed6g0872 696 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 32 682 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0872 Aed-Chr6 8860765 8866191 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0872 484 658 WRKY Transcription Factor Family AT4G12020 27.638 8.84e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0872 - - gmx:100809435 1137.48