Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0870 ATGGAAGAGATGGCACCATTAATCAAGCGTCCTTATGGTATACCTGAAAAGCCAGAATTCACCGTTGGATTGGATGTACTATTGAGCGAGTTGAAGATGGAACTTCTTAAAGAAGGTGTGTCCACAATTGTGGTTACCGGTTTAGGAGGATCCGGAAAAACTACTTTGGCTACTAAGCTCTGTTGGGATGAACAAGTCATAGGTAAATTCAAGGAAAACATTTTATTCATCACCTTCTCAAAAACACCGAACTTAAAGATTATTGTAGAAAGACTATTTGAACATTGGGGATATCATCAGCTTCCTGAGTTTCAAAGTGATGAAGAAGCACTTAATCAATTGAGACTTTTGCTGAGGAAAATTGACACAAGTTCTATGTTGGTCTTGGATGACGTCTGGCCTGGCTCAGAAGACTTAGTTGACAAATTTAGAGTTCAGATATCAGATTATAAAATTTTGGTTGTGAGACATTGTAAGGGATTGCCGCTAGTCATTAAAGTGATTGGTAGATCACTGAGTAATCAACCTTATCAGTTGTGGCAAAAGATGGTGGAGGAATTGTCACATGGTCATGGTCATACTATACTTGATTCTAACACTGAAATACTCACTTCCCTTCAAAAGATCTTAGATGTCTTAGAAGACAATCCCATCGTGAAAGAGTGCTTCATGGACTTAGCTTTATTTCTTGAAGACCAAAGAATTAATGTTGCTGCTCTTGTTGATATGTGGGTAGAGCTGAAAAATGTTAGTGACACAGACAGTTACTACTACAACAACCATTTCATCATCCTTCATGATATTCTAAGAGACTTTGCAAGTTATCAAAGCACCCAAGAACCAATTCAACAGAGAAAAAGACTGATGATCGACATGATTGAAAATAAACATGAATCGTGGCTTAAAGAAAAACCACAACAGATCCTTGCTCGAACATTATCTATATCAACCGATGAAACTTGCACATCATGTTGGTCCAACCTGCAACCAGCTCAAGCCGAGGTTCTGATTTTAAACCTTCAAACTAATCAATATACCTTTCCAATGTTACTGAAAGAAATGAGTAAACTAAAAGTTCTGATAGTCATACATCATGGTTTCCATCCTTCTATAATGAACAATTTTGAGTTGCTTGGCTCATTATCCAACCTAACAAGAATCAGATTAGAGCGGATTACTGTTCCTCCCTTTGTTACATTGAAGAATCTTAAAAAGTTATCCCTCTACATGTGTAACACAAGCCAGGCTTTTGAAACCGAAAACATGCTAATTTCAAATGCTTTTCCAACTCTAGAAGATTTGAATATTGACTATTGCAAAGACTTGGTAGAATTGCCTAAGGGGCTATGTTATATCACTTCTCTAAAGATGCTCAGTATTACTAATTGTCATAAGCTTTCTGCATTGCCTCAAGAAATTAGAAACCTGGAGAGTTTGAAACTACTAAGGCTAAGTTCCTGTACTGATTTGGAAGGGATACCAAATTCTATTGGAAGGCTTTCAAATCTAAGACATGTGGACATCTCAAACTGCATAAGCCTTCTGAATTTACCAGAGGAGTTTGGTAATATTTGTAATCTAAGAAGTCTCTACATGACAAGTTGTGCAAGGTGTGAGTTGCCATCCTCAATCGTCAATCTCGCGAATTTGAAAGAGGTGGTTTGTGATGAAGAGACAGCTGCTTCATGGGAAACTTTCAAACCTATGCTTCCCAATCTAAAGATAGAGATTCCTCAACTTGATGTTAACTTGAATTGGCTCCATGCAATTCACTCTTAA 1779 0.3738 MEEMAPLIKRPYGIPEKPEFTVGLDVLLSELKMELLKEGVSTIVVTGLGGSGKTTLATKLCWDEQVIGKFKENILFITFSKTPNLKIIVERLFEHWGYHQLPEFQSDEEALNQLRLLLRKIDTSSMLVLDDVWPGSEDLVDKFRVQISDYKILVVRHCKGLPLVIKVIGRSLSNQPYQLWQKMVEELSHGHGHTILDSNTEILTSLQKILDVLEDNPIVKECFMDLALFLEDQRINVAALVDMWVELKNVSDTDSYYYNNHFIILHDILRDFASYQSTQEPIQQRKRLMIDMIENKHESWLKEKPQQILARTLSISTDETCTSCWSNLQPAQAEVLILNLQTNQYTFPMLLKEMSKLKVLIVIHHGFHPSIMNNFELLGSLSNLTRIRLERITVPPFVTLKNLKKLSLYMCNTSQAFETENMLISNAFPTLEDLNIDYCKDLVELPKGLCYITSLKMLSITNCHKLSALPQEIRNLESLKLLRLSSCTDLEGIPNSIGRLSNLRHVDISNCISLLNLPEEFGNICNLRSLYMTSCARCELPSSIVNLANLKEVVCDEETAASWETFKPMLPNLKIEIPQLDVNLNWLHAIHS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0870 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 226 IPR027417 -
Aed6g0870 592 Gene3D Ribonuclease Inhibitor 270 574 IPR032675 -
Aed6g0870 592 Gene3D - 6 159 IPR027417 -
Aed6g0870 592 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 19 578 IPR039203 GO:0050832
Aed6g0870 592 SUPERFAMILY RNI-like 338 557 - -
Aed6g0870 592 PRINTS Disease resistance protein signature 119 133 - -
Aed6g0870 592 PRINTS Disease resistance protein signature 474 490 - -
Aed6g0870 592 PRINTS Disease resistance protein signature 42 57 - -
Aed6g0870 592 Pfam NB-ARC domain 29 136 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0870 Aed-Chr6 8805185 8811304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0870 380 554 WRKY Transcription Factor Family AT4G12020 27.638 8.51e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0870 - - gmx:100793054 924.08