Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0860 ATGGATCGGGCGGCGTTGACGGTTGGACCGGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGGTCCGCGACATCGGGTCCGGAAATTTCGGCGTGGCGAGGCTGATGCAGGATAAACAGACCAAGGAACTCGTCGCTGTCAAATACATCGAAAGGGGTGATAAGGCACGATTCTTCTTTCAGCAACTCATATCTGGGGTCAGCTATTGCCATGCTATGCAAGTATGCCATCGGGACTTGAAGCTGGAAAACACTTTGCTGGATGGAAGCCAGGCACCTCGTTTAAAGATATGTGATTTTGGGTATTCCAAATCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGCTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGAGCTTATCCTTTTGAAGATCCCAACGAACCAAAGGACTTTCGGAAGACAATTCAAAGAATTCTTAGTGTCCAGTATTCCATTCCAGACAGTGTTCAAATATCTCCAGAGTGTTGCCACCTTATCTCAAGGATTTTTATTTTTGACCCAGCAGAGAGAATCACCATGTCTGAAATCTGGAACCATGCATGGTTTCTGAAGAATCTCCCGGCAGACCTGATGGACGAGAAGACAATGAGCAACCGATTCGAAGAGCCAGACCAGCCCATGCAGGGCATCGACACAATCATGCAGATAATTTCAGAAGCGACTGTGCCGGCAGCTGGGAGCTATCCTTTTGACCAGTTTATGGAGGAGCAAATTTATGACTTGGAATCGGAATCTGATGCTGAATCTGATCTTGACATAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 906 0.4669 MDRAALTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSQAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYSIPDSVQISPECCHLISRIFIFDPAERITMSEIWNHAWFLKNLPADLMDEKTMSNRFEEPDQPMQGIDTIMQIISEATVPAAGSYPFDQFMEEQIYDLESESDAESDLDIDSSGEIVYAI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0860 301 Gene3D Phosphorylase Kinase; domain 1 20 59 - -
Aed6g0860 301 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 59 - -
Aed6g0860 301 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 58 295 - -
Aed6g0860 301 SMART serkin_6 23 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0860 301 PANTHER SERINE/THREONINE KINASE 14 59 - -
Aed6g0860 301 PANTHER SERINE/THREONINE KINASE 58 295 - -
Aed6g0860 301 Gene3D Transferase(Phosphotransferase) domain 1 60 227 - -
Aed6g0860 301 SUPERFAMILY Protein kinase-like (PK-like) 16 260 IPR011009 -
Aed6g0860 301 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Aed6g0860 301 ProSiteProfiles Protein kinase domain profile. 1 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0860 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Aed6g0860 301 Pfam Protein kinase domain 58 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0860 Aed-Chr6 8557944 8563596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0860 58 228 CBL-interacting serine-threonine protein kinases AT5G10930 46.629 4.62e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed6g0860 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0860 K14498 - gmx:100801175 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0860 6 8557944 8563596 Aed11g1382 11 18469273 18475170 PCT