Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0857 ATGGTGAAGACATTAGTCTACCAAGCGGAGGCACATGTAAGGGACCTTGTGTATGGGTGCATGTCCCTCATATGGGAGTTGATGCAAAATCTTCGAAAGGTGAAAGAAGATCTTGCCAAAGCCCAAATGAAGTTGGCCCAATACATGGGCCTAGAGTTCGTGCAAGAGCTAAGTCCCAGCTATAGTGGTGGGTCTTCTTCGAATGGTAAGGTTATGACACATTTGCAACCGACTATGATGGAGCATGGCTCTACTCCCTCTATTCCCATTGATGTTGGTAATCTTGACAAGTGA 294 0.4592 MVKTLVYQAEAHVRDLVYGCMSLIWELMQNLRKVKEDLAKAQMKLAQYMGLEFVQELSPSYSGGSSSNGKVMTHLQPTMMEHGSTPSIPIDVGNLDK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0857 97 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 70 - -
Aed6g0857 97 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 2 70 - -
Aed6g0857 97 Pfam Lateral organ boundaries (LOB) domain 2 42 IPR004883 -
Aed6g0857 97 Coils Coil 24 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0857 Aed-Chr6 8444598 8444891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0857 2 61 AS2 family AT2G23660 43.333 4.92e-11 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed6g0857 LOB 4.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0857 - - gmx:102663028 119.398