Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0852 ATGAGGTGGTTACCTACGCTTTCGTTCTCGCCTTCTTCTTCTTCCTCTTCGCCGTCGTCGTCTTCGTCTTCCTCCACCGTCGACCACCGCCGGAAAACGTGGCTCTTCGGAAATTCTTCGAAGAAGCGCGCCTGCCACGTCGGCGATCACGATGAAGATGCACTCGCTTCTTCCCCCGGCACGCCTCAGCCGCTGCCCCTGCCGGAGCTCGCCGCCCCCGCAACCTTTGTGATCCGTCAACGAGACGGAGAGTGCCGTCTTCCCTCGCCCAAGGATGCTCCACCCGCCGCCGCCACCACCGGCCTTCGGATGCGGAGCCCAGACATAGGAAAGATGGAGCAGGCTGAAACTAGGTCATCAAGAGTGGTGCAGCAAGATGCAAGTGGTTGCTCTGACAGTGCTCGAGATAATTGTAACAATAACAATAATAACATGGTGAATGTCCCTCGTAGGAGGAGTATTTCAGGCAGTTCTCTTGCAAGTCCTTCTATGAGTCCTAAGAAAACAAAGAATGGTGAGTTTGTGCCATATTTTTACGCATGTCCTAAAGGAAATCAGTTCTGGTCCGCACCAGAAATGCATAACGGTGAAGCAGGGTTGCTACCTCCTGCCTTCTTTGATTTATCCTTATTAAGCACAGATGCTTCTCCTTCTCCCACCTCCCATCAAAGTCCACAGAGGAAAACTCCCCAGAAACAACATGCCAGAGTTTTGAGTGGCCCTCCATCCCCCATACATACTATGTTATCTCTTGAGATTGCCACAGCACGCCGCGAAAGTAATGCTCCTGCTGTTGGTGTTCACCCCTTGCCCCTGCCTCCCGGGGCTGCCTTGACCTTGCCACCTGCTTCCAGTAACTTTTCCCATGCCGTGGCTGCTAAGTCAGAATCGTTGCCTAGGAAAAGCCAATGGCAGAAAGGGAAACTTATTGGGCGTGGGACGTTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACCGGTGCATTATGTGCAATGAAGGAAGTAGAATTATTTCCCGACGATCCAAAATCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCAATCTAAAACATTCAAACATTGTACAGTATTATGGCAGTGAAATAGTTGAGGACCGGTTTTATATTTTTCTGGAATATGTTCATCCCGGTTCAATTAATAAATATGTCCGTGATCATTGTGGTGCCATAACAGAATCTGTCATTCGAAATTTTACTCGTCATATTCTCTCAGGGTTGGCTTATTTACATAGCAAAAAAACAATTCACAGGGACATAAAAGGGGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTAGCTGATTTTGGGATGGCTAAGCATGCTGTGATACAAAAGGATAACAACCCTGATCTTGCTTATGCTATTGATATTTGGAGTTTGGGTTGTACCATCATTGAAATGTTCACTGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTCTGTTTAAGGTTATGAAGGAGACCCCTCCTATACCTGAAACATTGTCAGCTGAGGGCAAAGATTTCTTGAGGTGTTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACGGCTGCAGCTTTACTAGAACACCGATTTCTGAAAAACTCACAACAACAGCCGGATTTGTCAACCCCCTGTGCAAAGACTGCAAAGGGTAAAGCAGCCGAGAGGCGAGGATTTCTCATTCCTTCGTTAGATATTCTCCCAACATACTTAGACCAATAA 1752 0.4737 MRWLPTLSFSPSSSSSSPSSSSSSSTVDHRRKTWLFGNSSKKRACHVGDHDEDALASSPGTPQPLPLPELAAPATFVIRQRDGECRLPSPKDAPPAAATTGLRMRSPDIGKMEQAETRSSRVVQQDASGCSDSARDNCNNNNNNMVNVPRRRSISGSSLASPSMSPKKTKNGEFVPYFYACPKGNQFWSAPEMHNGEAGLLPPAFFDLSLLSTDASPSPTSHQSPQRKTPQKQHARVLSGPPSPIHTMLSLEIATARRESNAPAVGVHPLPLPPGAALTLPPASSNFSHAVAAKSESLPRKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVELFPDDPKSAECIKQLEQEIKVLSNLKHSNIVQYYGSEIVEDRFYIFLEYVHPGSINKYVRDHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHAVIQKDNNPDLAYAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSAEGKDFLRCCFKRNPAERPTAAALLEHRFLKNSQQQPDLSTPCAKTAKGKAAERRGFLIPSLDILPTYLDQ 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0852 583 MobiDBLite consensus disorder prediction 211 243 - -
Aed6g0852 583 MobiDBLite consensus disorder prediction 211 233 - -
Aed6g0852 583 SUPERFAMILY Protein kinase-like (PK-like) 301 553 IPR011009 -
Aed6g0852 583 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 549 - -
Aed6g0852 583 MobiDBLite consensus disorder prediction 1 68 - -
Aed6g0852 583 ProSitePatterns Protein kinases ATP-binding region signature. 310 333 IPR017441 GO:0005524
Aed6g0852 583 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 549 - -
Aed6g0852 583 MobiDBLite consensus disorder prediction 1 33 - -
Aed6g0852 583 Gene3D Transferase(Phosphotransferase) domain 1 300 567 - -
Aed6g0852 583 SMART serkin_6 304 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0852 583 MobiDBLite consensus disorder prediction 83 167 - -
Aed6g0852 583 Pfam Protein kinase domain 305 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0852 583 MobiDBLite consensus disorder prediction 117 167 - -
Aed6g0852 583 ProSiteProfiles Protein kinase domain profile. 304 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0852 Aed-Chr6 8297782 8303114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0852 107 547 MAP Kinase Kinase Kinase AT5G66850 59.544 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed6g0852 Pkinase 6.7e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0852 - - gmx:100796935 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1387 11 18515449 18520250 Aed6g0852 6 8297782 8303114 PCT