Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0849 ATGGTGAACCCTAGATGCTTCCTCGACATCACCATCGGCGGCGAGTTAGAAGGCAGAATCATCATCGAGCTCTTCCACGATGTTGTTCCCAAAACCGCCGAGAATTTCCGAGCCCTCTGCACCGGCGAAAAGGGCATCGGCCCCAACACCGCCGTCCCCCTCCACTACAAGGGGATGTGTTTCCACCGCGTGATCAAAGGGTTCATGATCCAGGGCGGCGACATCTCCGCCGGGGACGGGACCGGCGGGGAGTCAATCTACGGCGCCAAGTTCGAGGACGAGAGCCTCGAGATGAAGCACGAGAGGAAGGGGATGCTCTCCATGGCCAATTCGGGACCCGACACCAACGGTTCCCAGTTCTTCATCACCACCACGCGCACACCTCACTTGGACGGGAAGCACGTCGTGTTCGGGAAGGTACTCAAGGGAATGGGCGTTGTCCGCTCTGCGGAACACGTTGTCACCGGCGAGAACGACCGGCCTACTCAGGACATTGTGGTTGCTGACTGTGGGGAGATTGCTGAAGGGGAAGATGACGGAGTTGTTAACTTCTTTAAGGATGGTGACACCTATCCCGATTGGCCCGCTGATCTCGATGTCAAACCGGATGAACTCTCTTGGTGGACGAGTGCTGTGGAAGCTATCAAAACTCTTGGGAATGACCAGTATAAGTATCGCAAAGCTTTGCGGTATTTGGATGTGTGTTGGGAGAAGGAGGACATTGACCAAGAGAATAGCGCTGCTTTGAGGAAGACAAAATCTCAAATCTTCACCAACAGTTCGGCTTGTAAATTGAAATTAGGTGATCTACAAGGAGCATTAATGGATTCAGACTTTGCGATGCACGATGGAGATAATGCAAAAGCTCTGTTTCGCAAAGGCCAGGCATATATGTTACTCAACGATCTAGATTCTGCTGTTGAAAGTTTCAAGAAAGCATTAGAGTTGGAGCCAAATGATGGAGGGATTAAAAAAGAGTATGCCATTGCTAGGAGGAAGGTTGCCGATAGACGTGATAAAGAGAAAAAAGCTTATTCTAGAATGTTCAATTAG 1053 0.5081 MVNPRCFLDITIGGELEGRIIIELFHDVVPKTAENFRALCTGEKGIGPNTAVPLHYKGMCFHRVIKGFMIQGGDISAGDGTGGESIYGAKFEDESLEMKHERKGMLSMANSGPDTNGSQFFITTTRTPHLDGKHVVFGKVLKGMGVVRSAEHVVTGENDRPTQDIVVADCGEIAEGEDDGVVNFFKDGDTYPDWPADLDVKPDELSWWTSAVEAIKTLGNDQYKYRKALRYLDVCWEKEDIDQENSAALRKTKSQIFTNSSACKLKLGDLQGALMDSDFAMHDGDNAKALFRKGQAYMLLNDLDSAVESFKKALELEPNDGGIKKEYAIARRKVADRRDKEKKAYSRMFN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0849 350 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 CDD cyclophilin_ABH_like 4 171 - -
Aed6g0849 350 Gene3D - 1 179 IPR029000 -
Aed6g0849 350 SUPERFAMILY Cyclophilin-like 1 176 IPR029000 -
Aed6g0849 350 Pfam Tetratricopeptide repeat 287 320 IPR001440 GO:0005515
Aed6g0849 350 ProSiteProfiles TPR repeat profile. 287 320 IPR019734 GO:0005515
Aed6g0849 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 SMART tpr_5 287 320 IPR019734 GO:0005515
Aed6g0849 350 Gene3D Tetratricopeptide repeat domain 212 350 IPR011990 GO:0005515
Aed6g0849 350 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 1 350 - -
Aed6g0849 350 SUPERFAMILY TPR-like 213 347 IPR011990 GO:0005515
Aed6g0849 350 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
Aed6g0849 350 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 350 - -
Aed6g0849 350 ProSiteProfiles TPR repeat region circular profile. 287 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0849 Aed-Chr6 8191822 8195445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0849 17 170 U-box Gene Family AT5G67530 44.516 2.87e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0849 K05864 - gmx:100805889 665.611