Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0847 ATGCATCTATCCATGGATCTTAATAATGACGACATCAACTTTGATTGTGAATTTATCCAGAAATTGTTACTAATGGAACCCGAACATTTCTGTTTATCTAGTGAAGAACATAATGCACTGTCCCTTCAGAAACAACAGCAACAACAACAACAGAAAAATGCTCCTTTTGGCGTTGAACAGGGAAATGTTCCGTTCCCTGATCCAATGACCCAGGTTCAATTCATGGAGGGCAATAATAATAATAATAATAAGTTTCCCATTCCTATCGTTGTTGATATGGATGAGGGTCCATCGAGGAGGAAGGGTAAGGAACCTATGCCTAAAGGCCAAGATCAATTCTTGATGCATGGCAATGATAATTTTTTCAATATTGGTAACTCTGAAGCACCACCATTACCGGGTCCATTCCCGCAGCAAGATGTGAGGCCACTTAGTCCTTGGCCTCCACCACGAGAGCCATTCTCTTGCAGTTGCTGTGAAGTTCTTAGACAAATCAATTACACCAATGGTCATAGGTTTGAAAGGCTCGAGATTCATGGAGGGGTTGGTGCGATAAACCACGCAATATGGCACGTTACGGATAAGACACCATGTCCAAACGGCACAGAGCCCGAGCCCGAGCCCGAACCCGAACCCGAACCCGAGAATGGAGGAAAGCCTTCAACTTCTAGGCCTAAACGTAATATGGCAGTTCAGAGGCAGAGAGTCCTATCGATGACACTGAGCAATTTAGGCAGTTTCTTCCATTTGACTCTTAGTGCTGCAGCGATTAAATTAGATCTATGCGACTCGGCCGTCAAAAAAATCTGCCGCAGAGGACAATTGAAACGATGGCCTCAAAGAAAGGTGCAAAGCCTTGCGAGAAAGGTAAGAGTGCTCAGAAGAGCATTGAGTTCACCAAATCCAGTGGTGGTTAGAAGAACACGAGACGAAATTAGGAGACTCCAACTAGAAATATTAGACAATTGTGGTGGAGTTACTCCAACCGGAATTGAAATGCTCCATCTTGATGAAGAATAG 1020 0.4392 MHLSMDLNNDDINFDCEFIQKLLLMEPEHFCLSSEEHNALSLQKQQQQQQQKNAPFGVEQGNVPFPDPMTQVQFMEGNNNNNNKFPIPIVVDMDEGPSRRKGKEPMPKGQDQFLMHGNDNFFNIGNSEAPPLPGPFPQQDVRPLSPWPPPREPFSCSCCEVLRQINYTNGHRFERLEIHGGVGAINHAIWHVTDKTPCPNGTEPEPEPEPEPEPENGGKPSTSRPKRNMAVQRQRVLSMTLSNLGSFFHLTLSAAAIKLDLCDSAVKKICRRGQLKRWPQRKVQSLARKVRVLRRALSSPNPVVVRRTRDEIRRLQLEILDNCGGVTPTGIEMLHLDEE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0847 339 PANTHER PROTEIN RKD4 34 191 IPR044607 GO:0003700
Aed6g0847 339 PANTHER PROTEIN RKD4 208 323 IPR044607 GO:0003700
Aed6g0847 339 ProSiteProfiles RWP-RK domain profile. 218 307 IPR003035 -
Aed6g0847 339 MobiDBLite consensus disorder prediction 193 230 - -
Aed6g0847 339 Pfam RWP-RK domain 238 286 IPR003035 -
Aed6g0847 339 PANTHER RWP-RK DOMAIN PROTEIN 34 191 - -
Aed6g0847 339 PANTHER RWP-RK DOMAIN PROTEIN 208 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0847 Aed-Chr6 8161732 8164222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0847 238 299 NLP Transcription Factor Family AT4G24020 33.871 2.59e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aed6g0847 RWP-RK 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0847 - - gsj:114414137 196.052