Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0845 ATGGGTCTCTGCATTTCAAAGCCTAGTGCAAATTATGCAGACACAAACCCCACAACAACAACACTCTTTTCTTCTGCAAATTCCCACACCCACTTCACAGAAACCAATGCCAACGAAAATTCACGAAAAAACCCCACTCCCACACCCAAAAAATCTCCTCTTTTCCCGTTCTACACGCCGAGCCCGGCGCACCACCTCTTCTCTGGCAAGTCTCCAGCGCCGGCGACACCCCGGCGGTTCTTCAGGCCGCCGTCTCCGGCGAAGCACATCCGGGCCGTGCTGGCCCGGCGCCACGGGTCCGTGAAGCCCAACGGGCCCGCCGGCGCCATCCCGGAGGATGATGACATGGTTTCTCTCGACAAGAACTTCGGATTCTCCAAACAGTTCGAGCAGAAGTACGAGGTTGGGGACGAGGTCGGAAGGGGACACTTTGGTTACACTTGTGAAGCTAAGTTCCTTAAGGGCCAACTCAAAGGCCAACGTGTCGCTGTCAAAGTCATCCCCAAAGCAAAGTTCCATGATGCGTATGAGGACAGTGACAATGTCTACATAGTAATGGAGTTGTGCGAAGGAGGGGAGCTTTTGGACAGAATATTGTTGAGAGGTGGGAAATACACAGAGGAAGATGCAAAAGCTGTCATGATACAGATACTGAATGTTGTTGCATTTTTCCATCTACAAGGTGTTGTGCATCGTGATCTTAAACCTGAGAATTTCTTATTCACATCCAAAGATGAAAACTCTGAGCTGAAGGCCATTGATTTTGGATTGTCAGATTTTGTCAAACCAGATGAAAGGCTTAATGACATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTTCACAGAGCTTACAGCACAGAGGCTGATGTGTGGAGTGTTGGAGTGATTGCATACATTTTATTATGTGGCAGCCGTCCGTTCTGGGCGCGGACCGAATCCGGGATTTTTCGTGCTGTGCTGAAAGCTGATCTGAGTTTTGATGAACCTCCCTGGCCTTCGTTGTCGGATGAGGCAAAGGATTTTGTTAGGAGACTTCTCAATAAAGATCCAAGGAGAAGAATGACTGCAGCACAAGCATTAGGTCATCCATGGATTAAAAATTATAAGGATGTAAGAGTTCCCCTGGATATACTTGTGTTCAAGCTCATGAAAACATACATGCGTTCCTCTTCTCTACGAAAAGCTGCTTTAAGGGCTTTGTCTAAGACATTAGCTATTGAAGAGCAGCAATATTTGAAGGAGCAGTTTGCACTTTTAGAGCCAAACAAAACTAACACCATTAGCTTGGAAAATATCAAAACGGCCTTGATGAAGAATGCAACAGATGCAATGAAGGAATCCCGCATTCCCGATTTTCTCGCATCAGTAAGTGCTTTGATTTAA 1389 0.468 MGLCISKPSANYADTNPTTTTLFSSANSHTHFTETNANENSRKNPTPTPKKSPLFPFYTPSPAHHLFSGKSPAPATPRRFFRPPSPAKHIRAVLARRHGSVKPNGPAGAIPEDDDMVSLDKNFGFSKQFEQKYEVGDEVGRGHFGYTCEAKFLKGQLKGQRVAVKVIPKAKFHDAYEDSDNVYIVMELCEGGELLDRILLRGGKYTEEDAKAVMIQILNVVAFFHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSVGVIAYILLCGSRPFWARTESGIFRAVLKADLSFDEPPWPSLSDEAKDFVRRLLNKDPRRRMTAAQALGHPWIKNYKDVRVPLDILVFKLMKTYMRSSSLRKAALRALSKTLAIEEQQYLKEQFALLEPNKTNTISLENIKTALMKNATDAMKESRIPDFLASVSALI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0845 462 CDD STKc_CAMK 132 366 - -
Aed6g0845 462 MobiDBLite consensus disorder prediction 33 52 - -
Aed6g0845 462 ProSiteProfiles Protein kinase domain profile. 133 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0845 462 Gene3D Transferase(Phosphotransferase) domain 1 194 379 - -
Aed6g0845 462 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 171 461 - -
Aed6g0845 462 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 38 171 - -
Aed6g0845 462 Gene3D - 385 406 - -
Aed6g0845 462 Gene3D - 407 447 - -
Aed6g0845 462 SUPERFAMILY Protein kinase-like (PK-like) 127 392 IPR011009 -
Aed6g0845 462 Pfam Protein kinase domain 171 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0845 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Aed6g0845 462 PANTHER SERINE/THREONINE-PROTEIN KINASE 171 461 - -
Aed6g0845 462 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 171 - -
Aed6g0845 462 MobiDBLite consensus disorder prediction 33 48 - -
Aed6g0845 462 SMART serkin_6 133 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0845 462 Gene3D Phosphorylase Kinase; domain 1 124 171 - -
Aed6g0845 462 ProSitePatterns Protein kinases ATP-binding region signature. 139 165 IPR017441 GO:0005524
Aed6g0845 462 Gene3D Phosphorylase Kinase; domain 1 172 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0845 Aed-Chr6 8123730 8128919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0845 1 461 EF-hand Containing Proteins AT3G50530 64.991 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed6g0845 Pkinase 8.4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0845 K00924 - gmx:100803313 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0845 6 8123730 8128919 Aed11g1389 11 18527402 18537456 PCT