Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0812 ATGGATGTGGACATAGTGAAAGCTCCCAACAACAACACCAACATGGACTTCATGGCAATGATGATGCAAATGGAAAAGTTCCCCGAATTATTCTCCGACCCTTTTTACAAAACCGATTTGTTATCGAGTGGAAGCTCTTCCACCACAAGTGGAGGAGTTTCCACCCTATTCAACGATGTAACACTACCGAGTGTGGTCAATCCAACAAATAAGTTAAGTAACGTCGTCCAGTTTTTGAACATGGAGGACGATGATGACGGCCTTTTCCGACAACAAGGTAATTCTTTCTTCCCCTATCCTTCGGAGAGGAAGAGCTCCTCCTCCTCCTCCTCCTCGATGGCGGCGATGAGGGAGATGATATTCCGGATAGCGGTGATGCAGCCGGTGCACATCGACCCGGAGTCGGTGAAGCCGCCGAAGAGAAGGAACGTGAGGATCTCGAAGGATCCGCAGAGCGTGGCGGCGCGCCACCGGAGGGAGAGGATAAGCGAGAGGATAAGGATTCTGCAGAGATTAGTCCCGGGCGGAACCAAAATGGACACGGCCTCGATGCTGGACGAGGCCATTCATTACGTCAAGTTCTTGAAGAAACAGGTGCAGACCCTTGAACAAGTAGGGGCAAATAGGTCATCACACAATAATAATAACAACAACGTTGTTGATGGTGACGGCGGCGGCGGCAGCGGCGGTGCTGTTGGTTTTCCCTTAGGGATGTCTTCTAATTACTCCAATAATAATAATAATAGCAATAATATTAATAGCGTTGTTAATTATTCTTCTTTGTTGATGAAGGGTGCTTGCCAACCTTGTCAAGTGTTCGGTTCTAGTTCTAAACAATTGCTCAGCTGA 849 0.4794 MDVDIVKAPNNNTNMDFMAMMMQMEKFPELFSDPFYKTDLLSSGSSSTTSGGVSTLFNDVTLPSVVNPTNKLSNVVQFLNMEDDDDGLFRQQGNSFFPYPSERKSSSSSSSSMAAMREMIFRIAVMQPVHIDPESVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANRSSHNNNNNNVVDGDGGGGSGGAVGFPLGMSSNYSNNNNNSNNINSVVNYSSLLMKGACQPCQVFGSSSKQLLS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0812 282 Gene3D - 145 220 IPR036638 GO:0046983
Aed6g0812 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Aed6g0812 282 PANTHER TRANSCRIPTION FACTOR HEC2 1 256 - -
Aed6g0812 282 Pfam Helix-loop-helix DNA-binding domain 156 195 IPR011598 GO:0046983
Aed6g0812 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 205 IPR036638 GO:0046983
Aed6g0812 282 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 256 IPR045843 GO:0003700|GO:0006355
Aed6g0812 282 SMART finulus 152 201 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0812 Aed-Chr6 7381131 7381979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0812 11 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 53.712 5.22e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed6g0812 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0812 - - gmx:100800816 308.916