Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0811 ATGGACTGGATTCGAGGAGAAGCCGTTGGAAGAGGAAGCTTCGCCACCGTTAGTTTAGCGATTCTGAAGACAAAGACAAACCAAATTTGTTTTCCGTCTCTAACCGCGGTTAAGTCCGCGGAGTCTCAAGCCTCGTGCTGGCTGAGAAACGAGAAACACGTGCTGGATCGCCTAGGTTCGTCGTGTCCGTGGGTAATCCGCTGCTTCGGAGACGACATCAGTTTCGAGAACGGCGTCGAGTACTACAACCTCTTCCTCGAGTACGCCGCCGGCGGGAGTCTCGCCGACGTATTGAAAAGCCGCGGCGGACGGATCGCCGAGCGCGAGGCTCGGCGTTACACGAGGTCCGTCGCGAAGGGTTTGGACCACGTGCATAAGAGCGGGTTTGTCCACTGCGACGTGAAGCTTGAGAACATCCTCGTATTTAAAAATGGAGAGATCAAAATCGCAGATTTCGGGTTAGCTACGAAAACAGGGGAGAAACAGGGGAAGGGTGAATGCAGGGGGACTCCGATGTTTATGTCGCCGGAGCAAGTGACCGGCGGCGAGTACGGCACAGCGGCGGACATATGGGCCCTGGGATGCGCGGTGGTGGAGATGGTGACCGGGAAACCGGCGTGGCGGGTGGAGAACGGTGTTAGCATGTGGTCGCTGCTGCTCCGAATTGGAGCGGGAGAAGAGGTTCCCGAAATCCCTGACAATTTGTCTAAAGAGGGAAAAGATTTCATTGAGAAGTGTTTCGTGAAAGATCCTAAGAAGAGGTGGACCGCAGAAATGCTATTGAAACACCCCTTTCTCATTTCCGACGTTGACGATGACTACGACACTGTTTCATTTAAGCGTGTTCACGAAGAGTCGCCGAGAAGCCACTTCGATTTCCCCGATTGGGTTTCCAGCGTCTCGGCTTCGCTTCCCAGTTCGCCGGAGTTTCAAGACGACGAATTCGACGACGGTTTCTGTTCGCCGGAGGACCGGCTCCGGGCGCTTTTGACGGTTACTCCGCCGTCGAGTTGGTCGGAATCTGATGACGATGTGTGGAGTAGCGTTAGGTAA 1053 0.548 MDWIRGEAVGRGSFATVSLAILKTKTNQICFPSLTAVKSAESQASCWLRNEKHVLDRLGSSCPWVIRCFGDDISFENGVEYYNLFLEYAAGGSLADVLKSRGGRIAEREARRYTRSVAKGLDHVHKSGFVHCDVKLENILVFKNGEIKIADFGLATKTGEKQGKGECRGTPMFMSPEQVTGGEYGTAADIWALGCAVVEMVTGKPAWRVENGVSMWSLLLRIGAGEEVPEIPDNLSKEGKDFIEKCFVKDPKKRWTAEMLLKHPFLISDVDDDYDTVSFKRVHEESPRSHFDFPDWVSSVSASLPSSPEFQDDEFDDGFCSPEDRLRALLTVTPPSSWSESDDDVWSSVR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0811 350 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 306 - -
Aed6g0811 350 SMART serkin_6 3 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0811 350 Pfam Protein kinase domain 6 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0811 350 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 306 - -
Aed6g0811 350 CDD STKc_MAPKKK 2 266 - -
Aed6g0811 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Aed6g0811 350 ProSiteProfiles Protein kinase domain profile. 3 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0811 350 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Aed6g0811 350 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
Aed6g0811 350 SUPERFAMILY Protein kinase-like (PK-like) 3 307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0811 Aed-Chr6 7350159 7351211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0811 1 350 MAP Kinase Kinase Kinase AT5G67080 49.584 7.56e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed6g0811 Pkinase 4.3e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0811 - - gmx:100799752 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1414 11 18746699 18747745 Aed6g0811 6 7350159 7351211 PCT