Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0805 ATGGCTAAGGAAGAGGAACAGAAAAACCAACCGTTCGGAATCAGAGATCTGGGTCACAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTATCCAAGAGAGCACGAGTGCTTGAAGGAAATCCGCGAGATAACACAAAAACACCCACGGAACAGAATGGCTACACCACCAGACGAAGGACAACTTCTGAGCATGCTTATTAAGCTCACGAATGCGAAGAACACATTGGAAATTGGTGTGTTCACTGGTTACTCTCTGCTATCCACTGCTCTGGCTCTTCCCCCTGATGGAAAGATCTTGGCTTTGGATGTGAATCGCGAGTACTATGAGTTAGGATTGCCCATAATTGAAAAAGCTGGAGTGGCTCACAAGATTGACTTCATAGAAGGACCTGCTCTTCCGTTTCTTGACGAAATGTTACAAGATGAAAATAACAAGGGATCACTGGATTTTGTTTTCGTGGATGCTGATAAAGATAACTACTTGAACTATCACAAGAGGGTAATAGATCTCGTGAAGATTGGAGGGTTGATCGGATACGATAACACTCTATGGGCTGGATCTGTGGCGGCACCACCTGATGCACCGTTTATGGATTACATTAAGCCTCTTCGTGGCCATGTGATTGAGCTCAACAAGTACCTGGCTCAAGATTCGAGGATCGAGATTTGCCAGCTCCCCGAAAATAACAAGGGATCGTTGGATTTTGTTTTCGTGGATGCTGATAAGAATAACTACTTGAACTATCACAAGAGGGTAATAGATCTCGTGAAGGTTGGAGGGCTGATCGGGTACGATAATACTCTATGGGCTGGATCTGTAGCGGCACCACCTGATGCACCATTTATGGATTACATTAAGCCTCTTCGCGGCTATGTGATGGAGCTCAACAAGTATCTGGCTCAAGATTCAAGGATCGAGATTTGCCAATTCCCGTGGGCGATGGGATTACCCTATGTCGCCGCATCATGTGATCATTTCCTCTGCTTCTGGATATTTTAA 1023 0.4506 MAKEEEQKNQPFGIRDLGHKTLLQSDALYQYILETSVYPREHECLKEIREITQKHPRNRMATPPDEGQLLSMLIKLTNAKNTLEIGVFTGYSLLSTALALPPDGKILALDVNREYYELGLPIIEKAGVAHKIDFIEGPALPFLDEMLQDENNKGSLDFVFVDADKDNYLNYHKRVIDLVKIGGLIGYDNTLWAGSVAAPPDAPFMDYIKPLRGHVIELNKYLAQDSRIEICQLPENNKGSLDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWAGSVAAPPDAPFMDYIKPLRGYVMELNKYLAQDSRIEICQFPWAMGLPYVAASCDHFLCFWIF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0805 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 237 323 IPR029063 -
Aed6g0805 340 Gene3D Vaccinia Virus protein VP39 235 328 IPR029063 -
Aed6g0805 340 Gene3D Vaccinia Virus protein VP39 13 234 IPR029063 -
Aed6g0805 340 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 246 IPR002935 GO:0008171
Aed6g0805 340 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 242 330 IPR002935 GO:0008171
Aed6g0805 340 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 4 234 - -
Aed6g0805 340 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 235 324 - -
Aed6g0805 340 CDD AdoMet_MTases 83 185 - -
Aed6g0805 340 PANTHER O-METHYLTRANSFERASE-RELATED 4 234 - -
Aed6g0805 340 PANTHER O-METHYLTRANSFERASE-RELATED 235 324 - -
Aed6g0805 340 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 234 IPR029063 -
Aed6g0805 340 Pfam O-methyltransferase 34 234 IPR002935 GO:0008171
Aed6g0805 340 Pfam O-methyltransferase 235 324 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0805 Aed-Chr6 7269135 7272641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0805 138 324 Monolignol Biosynthesis Gene Families AT4G34050 41.176 1.59e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0805 K00588 - gmx:100305498 435.261