Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0804 ATGGCCAAGGAAGAGGAACATAAGACTCTCCTTCATAGCGATGCACTCTATCAGTATATACTTGAAACTAGTGTATATCCAAGAGAGCACGAGAGCAGAATGGTTACACCACCAGACGAGGGACAACTTCTGAGCATGCTTATTAAGCTCACGAATGCAAAGAAAACCTTGGAAATTGGTATCTTGGCTTTGGATGTGAACCGTGAGTACTATGAGTTAGGATTGCCGATAATTGAAAAAGCTGGAGAAAATAATAAGGGATCGTTGGATTTCGTTTTTGTGGACGCCGATAAAGATAACTACTTGAGCTATCATAAGAGGGTAATAGATCTTGTGAAAGTTGGAGGAATGATCACATACGATAACACTCTATGGGCTGGATCTGTGGCGGCACCACCTGATGCATCGTCAATAGATTACAATAAGCCTCTTCGCAGCTATGTGATGGAGTTCAACAAGTATCTAGCTCAAGATTCGAGGATTGAGATTTGTCAGCTCCCAGTTGGTGATGGCATTACCCTGTGTCGTCGCATCATCTGA 540 0.4278 MAKEEEHKTLLHSDALYQYILETSVYPREHESRMVTPPDEGQLLSMLIKLTNAKKTLEIGILALDVNREYYELGLPIIEKAGENNKGSLDFVFVDADKDNYLSYHKRVIDLVKVGGMITYDNTLWAGSVAAPPDASSIDYNKPLRSYVMEFNKYLAQDSRIEICQLPVGDGITLCRRII 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0804 179 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 83 179 - -
Aed6g0804 179 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 3 82 - -
Aed6g0804 179 PANTHER O-METHYLTRANSFERASE-RELATED 83 179 - -
Aed6g0804 179 PANTHER O-METHYLTRANSFERASE-RELATED 3 82 - -
Aed6g0804 179 Gene3D Vaccinia Virus protein VP39 8 84 IPR029063 -
Aed6g0804 179 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 177 IPR029063 -
Aed6g0804 179 Pfam O-methyltransferase 84 178 IPR002935 GO:0008171
Aed6g0804 179 Pfam O-methyltransferase 29 61 IPR002935 GO:0008171
Aed6g0804 179 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 178 IPR002935 GO:0008171
Aed6g0804 179 Gene3D Vaccinia Virus protein VP39 85 178 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0804 Aed-Chr6 7263524 7265874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0804 3 178 Monolignol Biosynthesis Gene Families AT4G34050 55.411 9.75e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0804 K00588 - gmx:100305498 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1421 11 18800924 18802190 Aed6g0804 6 7263524 7265874 PCT