Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0791 ATGTGGGATCTCAATGACTCACCCGATCAGAGGAGGAAGGAGGAGGAATCAGAAGAAGCGTGTTCTTCCCTCAAAACTTCCATAGATGGAGATGATGACAATAACAACAGCAACAGCAACAACAACAACAACAAAGGCAAGAGGGTTGGATCTGTTTCCAATTCGAGCTCCTCCGCAGTGGTCATCGAAGACGGATCAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGATGATGAGAGTGGCGGTGGAAGAAGCATGAAGAAACGAAGCAGTAACAAGATTTTCGGGTTCTCTATGACCCACGAAGAAGAACAAGAAGAAGAGTACTCCATGGACAGTACTAACCAGGTGCTGCCACCGGTAGTCACAACAAGACAGTTTTTTCCGGTGGTGGTGGAAGATGCTGACTTGGCGGCGGTTGCTGCGTCATCCGGTGGTGGCGGTGGCGGTGGTGGAAGTGGAAGCTCCTCCTCGACGTTCCCACGTGCTCACTGGGTGGGTGTGAGATTCTGCCAACCGGAAACACTCGACGCCGGAAAATCAGTGGAAGTTTCTCAGCCGATGAAGAAGAGTCGCAGAGGACCAAGGTCGAGAAGCTCTCAGTATAGAGGAGTCACCTTCTACAGAAGAACCGGTCGCTGGGAATCTCATATATGGGATTGCGGAAAGCAAGTGTATCTTGGTGGATTTGACACAGCACATGCAGCTGCTCGCGCCTACGATAGAGCCGCGATTAAGTTCCGGGGAGTGGAGGCCGACATAAACTTCAACATTGAAGATTACGAAGATGACTTGAAGCAGATGACCAATCTTACTAAGGAGGAATTCGTACACGTGCTTCGACGACAAAGCACTGGATTTCCCAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAAGCTCGTATGGGCCAATTCTTAGGAAAAAAATACGTTTATTTGGGTCTCTTTGACACCGAGATTGAAGCTGCGAGGGCTTATGATAAAGCTGCCATAAAATGCAACGGCAAAGAGGCAGTGACCAATTTTGATCCCAGCATCTACGAAAATGAGCTCAATTCCGAATCCACAGGTAACAACAGTAGTGCAGATCACAATCTGGATTTAAGTTTGGGCAATTCAAGTTCAAAGCCAGGCAATAGTAATAATATTCAAACATTGGGGAATCACGCCACAAATGCTGCAACAACCCATGATCAGAACCTGCCATCATCTGAGTCTAATTGGCGGAATGGAGGAAACAAACCTAAGCTGGTGAATATACTCCCAAAACCATGTAATGATAATAATAGAAGCAATAACAAGGAGGCACATGGAAGGGACGTGCACGGGGAGAGTGAAGCATTGAGGATGCTAAGTCAAACCCACCTTCATTCCCCAGCCTCCAATGAAATAATGCAACAAAGATATGGTCCCTACAGTTCTTCTCCCGCAGTGGGAGGAAGAGGAGACTCTCAAATGCTTCACAATTTTGCACACAACATTCACCCACCAAATTTTCATCATTTTCACAGCAGCAGCATTGGAGGTCGAATTGGAAGTGATCTTTCATTATCAATGGCTGATCAACAACAACAGTGGCAAACTGGTCCTCCACATTATTTAGCAACTGCTGCAGCATCATCAAGTTTCCAACAACAGATTATAAGACCCTCTTCTCAAGGCTGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCTCATGA 1728 0.4659 MWDLNDSPDQRRKEEESEEACSSLKTSIDGDDDNNNSNSNNNNNKGKRVGSVSNSSSSAVVIEDGSEEEEEDEEEEDDESGGGRSMKKRSSNKIFGFSMTHEEEQEEEYSMDSTNQVLPPVVTTRQFFPVVVEDADLAAVAASSGGGGGGGGSGSSSSTFPRAHWVGVRFCQPETLDAGKSVEVSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENELNSESTGNNSSADHNLDLSLGNSSSKPGNSNNIQTLGNHATNAATTHDQNLPSSESNWRNGGNKPKLVNILPKPCNDNNRSNNKEAHGRDVHGESEALRMLSQTHLHSPASNEIMQQRYGPYSSSPAVGGRGDSQMLHNFAHNIHPPNFHHFHSSSIGGRIGSDLSLSMADQQQQWQTGPPHYLATAAASSSFQQQIIRPSSQGWLQKNGFHTLMRPS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0791 575 MobiDBLite consensus disorder prediction 357 449 - -
Aed6g0791 575 MobiDBLite consensus disorder prediction 27 62 - -
Aed6g0791 575 Pfam AP2 domain 292 341 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 Pfam AP2 domain 201 249 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 MobiDBLite consensus disorder prediction 357 420 - -
Aed6g0791 575 MobiDBLite consensus disorder prediction 63 79 - -
Aed6g0791 575 SMART rav1_2 201 263 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 SMART rav1_2 293 356 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 SUPERFAMILY DNA-binding domain 200 258 IPR016177 GO:0003677
Aed6g0791 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 573 - -
Aed6g0791 575 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 573 - -
Aed6g0791 575 PRINTS Ethylene responsive element binding protein signature 332 352 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 PRINTS Ethylene responsive element binding protein signature 294 305 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 Gene3D AP2/ERF domain 200 259 IPR036955 GO:0003700|GO:0006355
Aed6g0791 575 Gene3D AP2/ERF domain 292 351 IPR036955 GO:0003700|GO:0006355
Aed6g0791 575 CDD AP2 292 352 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 MobiDBLite consensus disorder prediction 1 90 - -
Aed6g0791 575 MobiDBLite consensus disorder prediction 1 26 - -
Aed6g0791 575 ProSiteProfiles AP2/ERF domain profile. 201 257 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 MobiDBLite consensus disorder prediction 179 201 - -
Aed6g0791 575 ProSiteProfiles AP2/ERF domain profile. 293 350 IPR001471 GO:0003700|GO:0006355
Aed6g0791 575 SUPERFAMILY DNA-binding domain 292 352 IPR016177 GO:0003677
Aed6g0791 575 CDD AP2 201 258 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0791 Aed-Chr6 7127114 7132066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0791 293 575 AP2-EREBP Transcription Factor Family AT4G36920 27.108 6.90e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aed6g0791 AP2 4.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0791 K09284 - gmx:100792442 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1428 11 18848256 18852510 Aed6g0791 6 7127114 7132066 PCT