Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0786 ATGCATCGTGGTCATCATCCCAAAACGACAGCAACACTTCTCCTACACTTCCTGTCGTTCACCCTCGCCGCCTCTTCCCCCTCTACTCTCCCCTCCGACGCGGTCTCCTTATTGTCGTTCAAGCACCAAGCCGACTCAGACAACAAGCTCATCTACTCGGTAAACGAGCGGTACGACTACTGCTCCTGGCAGGGCGTGAAGTGCGCGCACGAGGGCAGAGTCGTCCGCTACGTCGTCCAGTCCATGGGCCTCCGCGGCCCGTTCCCGGCCCACACACTCACAAACCTCGACCAGCTCCGCGTCCTCAGCCTCCGCAACAACTCCCTCTTCGGGCCCATCCCCGACCTCTCCCCTCTCACCAACCTCAAGTCCCTCTTCCTCGATAACAACAACTTCTCCGGAACATTCCCCTCTTCCCTCCTCTTCCTCCACCGCCTCATTACTCTTTCACTCTCCCACAACACCTTCTCTGGTCCAATCCCCATTAACCTCACCGTCCTCGACCGCCTCATCGCTCTCTCGCTTTCCCACAACAATTTCTCCGGCTCGGTCCCGTCACTCAACCAGACAACCTTAAAACTCCTCGACCTCTCCGAAAACAATCTCACCGGCCCAATTCCAGTCACCCCCACACTTTCAAAGCTGAATGCCACGTCGTTTTCCGGTAACCCCGGTCTCTGTGGGGAGATTGTCCACAAAGAATGCGACTCTAGTTCTCACTCACACTTCTTCGGCCCTGCCACGTCATCGTCAAACACAACACCTTTAAGCCAGAGCGAACAGTCTCAGGGGATTCTAGTCGTTCCTTCTTCTTCAGAAACCAAAACTAAGCATAGTAAAAAAAAAACAGGACTTGTTGTTGGTTTTGTTGTCGCGGTTGTTCTGGCGGGTTCTTTTACTCTGGTGGTTGTTTCTTTGGTTAGAAAGAAACAGAATGATGCGGATGCTGAAGGTGAAGCTAAAGCGGCGAAAGGTGTGGTTTTGGAGAGTTCTGAAGAAGTGGTGGAAGGTGGAACCCTCAGGGAGGTGAAGATGAGAAAGATGGAGGAGGCGCACAGGAGTGGGAAGCTGGTGTTCTGCTGCGGGGAGGTGCAGCACTACACGCTGGAGATGCTGATGAGGGCTTCGGCGGAGTTGTTAGGGAGGGGGAGTGTGGGGACCACTTACAAGGCGGTGATGGATACGCGCCTCATTGTGACGGTGAAGAGGTTGGACGGAGGGAAAGCTACTGCGACGGCGGGGAGTGACGGAGGAGGGGAAGTGTTTGAGAAGCACATGGAGGTTGTGGGGAGGCTTAGGCACCCAAATTTGGTGCCTTTGAGGGCTTATTTTCAGGCAAAGGGAGAGAGGCTTGTGATTTATGATTATCAACCCAATGGCAGCCTCTTCAACCTCGTTCACGGTTCAAGATCTGCTAGGGCAAAGCCCTTGCATTGGACATCATGTTTGAAAATAGCAGAAGATGTAGCACAAGGACTTGCATATATCCACCAAGTATCATCCCTAATCCATGGCAACATAAAATCCTCAAACATCCTTCTTGGGGTGGACTTTGAGGCCTGCATCACGGACTACTGCCTGTCCTTGTTTGCAGACTCTTTGTTCTCCGAAGATGCCGATTCCGCAGCCTACAAAGCACCGGAGGCTCGCAACAACTCCTCCGGCAGTGGCCATGGCAGGGCCACGGCTAAGTCTGATGTGTATGCCTTTGGGGTGCTTCTAATTGAGCTTCTGACGGGCAAACACCCTTCCCAGCACCCTTTTCTTGCACCAGCTGATTTGCAGGATTGGGTCAGAGCAATGAGGGACGACGATGGTGGCAGCGAGGACAACCGGCTAGAGATGCTCACAGAGGTTGCCAGTATTTGCAGCGCAACCTCGCCGGAGCAGAGGCCGCCGATGTGGCAAGTACTCCAGATGATACAGGGAATTAAGGACAGTGTTACAATGGAGGAGGATACTGCACTTATGGACTCTCATAGTTTGTGA 1989 0.5344 MHRGHHPKTTATLLLHFLSFTLAASSPSTLPSDAVSLLSFKHQADSDNKLIYSVNERYDYCSWQGVKCAHEGRVVRYVVQSMGLRGPFPAHTLTNLDQLRVLSLRNNSLFGPIPDLSPLTNLKSLFLDNNNFSGTFPSSLLFLHRLITLSLSHNTFSGPIPINLTVLDRLIALSLSHNNFSGSVPSLNQTTLKLLDLSENNLTGPIPVTPTLSKLNATSFSGNPGLCGEIVHKECDSSSHSHFFGPATSSSNTTPLSQSEQSQGILVVPSSSETKTKHSKKKTGLVVGFVVAVVLAGSFTLVVVSLVRKKQNDADAEGEAKAAKGVVLESSEEVVEGGTLREVKMRKMEEAHRSGKLVFCCGEVQHYTLEMLMRASAELLGRGSVGTTYKAVMDTRLIVTVKRLDGGKATATAGSDGGGEVFEKHMEVVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAQGLAYIHQVSSLIHGNIKSSNILLGVDFEACITDYCLSLFADSLFSEDADSAAYKAPEARNNSSGSGHGRATAKSDVYAFGVLLIELLTGKHPSQHPFLAPADLQDWVRAMRDDDGGSEDNRLEMLTEVASICSATSPEQRPPMWQVLQMIQGIKDSVTMEEDTALMDSHSL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0786 662 ProSiteProfiles Leucine-rich repeat profile. 98 120 IPR001611 GO:0005515
Aed6g0786 662 Gene3D Ribonuclease Inhibitor 189 235 IPR032675 -
Aed6g0786 662 MobiDBLite consensus disorder prediction 246 273 - -
Aed6g0786 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 655 - -
Aed6g0786 662 PANTHER LRR RECEPTOR-LIKE KINASE 13 655 - -
Aed6g0786 662 SUPERFAMILY Protein kinase-like (PK-like) 378 641 IPR011009 -
Aed6g0786 662 ProSiteProfiles Protein kinase domain profile. 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0786 662 Pfam Protein kinase domain 377 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0786 662 Gene3D Transferase(Phosphotransferase) domain 1 458 660 - -
Aed6g0786 662 Gene3D Phosphorylase Kinase; domain 1 340 456 - -
Aed6g0786 662 SUPERFAMILY L domain-like 29 228 - -
Aed6g0786 662 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0786 Aed-Chr6 7036213 7041046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0786 28 653 Receptor kinase-like Gene Family AT3G50230 51.538 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed6g0786 Pkinase 9.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0786 - - gmx:100786526 999.579