Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0776 ATGGAGAACAAGTTAGAGACTGCAGACAAAAAGGTGCTTGTTGATATTGTAAAATTAGCACAAAAAAGAGGCCTAGAGGGTAATCTGGGAGGCTGGAAAGAGTTCTTGAAAAGTCAAGACAAGAAGTTCGGGTCAAGAGTGAGTGATCCATCAAAGAGACCCCCTGAGATATTGGTTGAATTTCTAAAGACATTTTCAAAGGAGGAAGAATTGAAGTTTTTTGATAACATCATGCAACATCATTCAAATCAACACATGTTGGAGCAACTGAAAGATGAATCGCATGATTCCCCTGAGCAGAGGCTAGTCCAAGCAACTCTGCGGAATCCATTATATCCATTGGATTATTCATTTAAATCAATTGATGAGGGGTGGATAATTGTAAAGTTAAAAAACAAACCTAAGGTGATGAAGTCTACTACAATGGTTGCTGTTGACTGTGAAATGGTTCTCTGTAAAGATGGGACTGAAGCGTTAGTTCAAGTCTGTGTAGTAGACCATAATTTAGAGGTCAAACTAAATGAACTTATAAAACCAGACAAAGAAATTGCAGACTACAGAACAGAGATAACTGGTGTCTCTTCTCAAGATCTAGAGGCAGTGACTTGCTCCTTGGCTGATATACAGAAACGCATGAAGAAGTTGTTATCAAGTGGAACCATATTAGTGGGACACAGTTTGCATAATGATCTGCAAGTGCTGAAGCTTGAACATGTTAGAGTGATTGACACTTCATATATATTCCAACCCTTGGGTGGATCTATTTACAGGAAACCTTCTTTGAATAGCTTATGTCAGGCAACCACTCCATTGGAGGAATCATGTTTTGAATGTAAAGCTGTGTTGGGCCGTGAAGTTAGGGAAGAGGGTGCTCCGCATAATTGTCTAGATGATGCACGTGCAGCTATGAACCTTGTTCTTGCGAAGATCAAACATGGAGTTGATAGAGAATTTCCAATTGCATCAGTTCAAGAGCTTGTTCCAGAAAATGAGATGGCAAAGCTTCTTCTTCACAACATACCAATCACTGTTGACATTGCAACATTGCATAAAATTATCCCTGGAGATTTCAAAATTGAACTGAAGCCTTCCAAGAAAGTTGAAGGAGCAAATTATGCTGCCTTTGCAATTTTTAAAACTTCACAAGAGGCAGCGGAGGCCTATGAAAATGTCTATGGAAGGGAATTAAAGGATACAAGTGGACGTCCCCAGAAACTTGCATTATTTCAGCTAAATACAGGTGTATCTGTCGATCTCTATATTCGGAAAATGCTAAGTGAAGAACCCAATATCCACATTCCATCTAAGAGGGCGTTACAAATGGATGAGGTGATTCATGTTTCCAAGAAAGCAAAGATGAAGCAAAATGAGAATGAAGCACTGAATCAACGATTGAAGCAAAATGAATTGGAGATTGAATCATTGAGGAAACAGTTGACACAAAAAGATTTTGAAATATCCATGCTGCATAAAATGGTATCCTCCTTAAGAAAGCGAAACCTATAA 1506 0.3871 MENKLETADKKVLVDIVKLAQKRGLEGNLGGWKEFLKSQDKKFGSRVSDPSKRPPEILVEFLKTFSKEEELKFFDNIMQHHSNQHMLEQLKDESHDSPEQRLVQATLRNPLYPLDYSFKSIDEGWIIVKLKNKPKVMKSTTMVAVDCEMVLCKDGTEALVQVCVVDHNLEVKLNELIKPDKEIADYRTEITGVSSQDLEAVTCSLADIQKRMKKLLSSGTILVGHSLHNDLQVLKLEHVRVIDTSYIFQPLGGSIYRKPSLNSLCQATTPLEESCFECKAVLGREVREEGAPHNCLDDARAAMNLVLAKIKHGVDREFPIASVQELVPENEMAKLLLHNIPITVDIATLHKIIPGDFKIELKPSKKVEGANYAAFAIFKTSQEAAEAYENVYGRELKDTSGRPQKLALFQLNTGVSVDLYIRKMLSEEPNIHIPSKRALQMDEVIHVSKKAKMKQNENEALNQRLKQNELEIESLRKQLTQKDFEISMLHKMVSSLRKRNL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0776 501 Gene3D - 137 321 IPR036397 GO:0003676
Aed6g0776 501 Coils Coil 451 485 - -
Aed6g0776 501 PANTHER SMALL RNA DEGRADING NUCLEASE 2 8 449 - -
Aed6g0776 501 Pfam Exonuclease 143 305 IPR013520 -
Aed6g0776 501 SMART exoiiiendus 141 315 IPR013520 -
Aed6g0776 501 SUPERFAMILY Ribonuclease H-like 142 310 IPR012337 -
Aed6g0776 501 CDD REX1_like 143 307 IPR034922 -
Aed6g0776 501 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 8 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0776 Aed-Chr6 6928081 6933248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0776 87 238 C2H2 Transcription Factor Family AT2G48100 32.298 1.08e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0776 K14570 - gmx:100785565 752.281