Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0775 ATGGCTCTCGGCGACGATGCGCAGCAGCAACACTCTCCCTCGTTCTTCGATGCCCTTCTCTGCGAAGAACAAGAAACCTTCGAGGAAGACTTTGATGCTAACGGTGACCAAACAAACGACCAATCTGCGATAAAGTCGCAGTCTTTAACGCCCTTGGTTCTTCTCGACAATGACTTGTTCTGGGAAGACGAAGAGCTCGTGTCGCTAATCGCGAAAGAGGGAGAGACCCATTTGTGTTTTAATGGTGATGGGGCTTTGGAATTAGAAGGGTCTCGCTCTGAGGCTGTGAACTGGGTTGCTAAAGTTTGTGGGCACTATGGGTTCTCTGCTTTGACCACTGTTTTCGCGGTCAACTACTTCGATAGGTTCGTGACGAGTTTGAGGTTTCAGAGGGACGACAAGCCGTGGATGACACAGCTCGCCGCCGTCGCGTGTTTGTCACTCGCTGCGAAGACGGAAGAGACCCATGTTCCACTCCTTCAGGATTTTCAAGTGGAGGAGTCGAGGTTTGTGTTTGAGGCGAAGACTATTCAGAGAATGGAGCTGCTGGTTCTGTCGACTCTTAAATGGAGGATGCATCCGGTGACCCCGATTTCCTTCTTTGAACACATTGTGAGAAGGCTTGGTTTGAAGAGCCGTTTGCATTGGGAGTTTCTATGGCGGTGCGAGCGGGTTCTTCTCAATGTCATTGCCGATTCAAGGGTTATGAGTTATCTCCCTTCTACATTGGCTGCTGCAACGATGATCCATGTTATTAAAGAGATTGAGTCATTTAATTCGACTGAGTACATTGATCAGCTTCTGGGTTTACTAAAGATTAGCGAGGAACAAGTGAACCAGTGCTACAAAATCATACAGAAACTATTAGGTTGCTATGATGGCATTTACAGCCTTCACCAGAAACGCAAGCGACTATCTGAACCGGGTAGCCCAGGTGCTGTCACTGATGCATCTTTCAGTTGTGAGAGCTCGAATGATTCATGGGCCCTGTCATCATCAGTCTCACTTTCAGTGGAGCCGCTGCTGAAGAGGAGAAGAGCTCAGGACCAACAAATGCGATTGCCTTCTGTTAATCGCGTGTCAATTGATGTTCTTAATAGTCCCCGTTAA 1110 0.4811 MALGDDAQQQHSPSFFDALLCEEQETFEEDFDANGDQTNDQSAIKSQSLTPLVLLDNDLFWEDEELVSLIAKEGETHLCFNGDGALELEGSRSEAVNWVAKVCGHYGFSALTTVFAVNYFDRFVTSLRFQRDDKPWMTQLAAVACLSLAAKTEETHVPLLQDFQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCERVLLNVIADSRVMSYLPSTLAAATMIHVIKEIESFNSTEYIDQLLGLLKISEEQVNQCYKIIQKLLGCYDGIYSLHQKRKRLSEPGSPGAVTDASFSCESSNDSWALSSSVSLSVEPLLKRRRAQDQQMRLPSVNRVSIDVLNSPR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0775 369 CDD CYCLIN 91 185 IPR013763 -
Aed6g0775 369 PANTHER CYCLIN-D3-2 6 352 - -
Aed6g0775 369 SMART Cyclin_C_2 195 322 IPR004367 -
Aed6g0775 369 Pfam Cyclin, C-terminal domain 195 290 IPR004367 -
Aed6g0775 369 Gene3D - 91 193 - -
Aed6g0775 369 SUPERFAMILY Cyclin-like 62 193 IPR036915 -
Aed6g0775 369 PANTHER CYCLINS 6 352 IPR039361 -
Aed6g0775 369 SMART cyclin_7 97 186 IPR013763 -
Aed6g0775 369 SUPERFAMILY Cyclin-like 196 295 IPR036915 -
Aed6g0775 369 Gene3D - 194 283 - -
Aed6g0775 369 Pfam Cyclin, N-terminal domain 90 192 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0775 Aed-Chr6 6907397 6910663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0775 1 359 Core Cell Cycle Gene Families AT5G67260 49.600 7.69e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0775 K14505 - gmx:100785030 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0775 6 6907397 6910663 Aed11g1440 11 18921632 18927845 PCT