Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0770 ATGATGGCGGTGGCCCGAAAGGATATGGACCGGATCAAGGGTCCGTGGAGCCCGGAGGAGGACGAGGCCCTGCAGAAGCTCGTGGAGAGGCACGGGCCGAGAAACTGGTCGCTGATCAGCAGGTCGATTCCGGGGCGGTCTGGGAAATCGTGCAGGCTTCGATGGTGCAACCAGCTGTCGCCTCAGGTGGAGCACCGGGCCTTCACGCCTGATGAGGACGAGACAATAATCAGGGCCCACGCCCGGTTCGGAAACAAGTGGGCCACAATAGCTCGCTTGCTCTCGGGCCGAACCGATAACGCCATCAAGAATCACTGGAACTCGACGCTGAAGCGCAAGTGCTCGTCCATCATGAACAGCGCCGACGATCACGCCGCCGCGGGGTTCAGCCCGAGGCCGCTGAAACGCTCCTTCAGCGCCGGCGCGGCGCTTCCTCCTCCTCCCGGAAGCCCCTCCGGATCGGACGTCAGCGAGTCCAGCACTCCCGGCGTGGTGTCCGTCTCTCCCTCGCACGTGTTCCGCCCCGTGCCTGTTCGACCTGTCGTCGAAACGGCGTCGTCCTCCGATGACGGACCTGCTACTTCGCTTTCGCTGTCTCTTCCCGGCGTGGAGTCAACTGAAATCTCTAATCGGGCCGCGGCGGTGCCGGTGATGCCGTTGACAACAGTGACGGCACCGTCTCCGGCGGCACTGGAGGTTGGTTTGGGAGCGATGAATTTGAGTTCGGAGTTTATGGCGGTGATGCATGAGATGATTAGGAAGGAGGTGAGGAGTTACATGGAGCAGCAGAATCATCAGAATGGGATGAAACATTTTCAGGGAATGGAAATTGAAGGGTTTAGGAATGTGTCGGTGAAGAGAATTGGGATTAGCAGGGTGGATTCGTAA 888 0.598 MMAVARKDMDRIKGPWSPEEDEALQKLVERHGPRNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRAFTPDEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSIMNSADDHAAAGFSPRPLKRSFSAGAALPPPPGSPSGSDVSESSTPGVVSVSPSHVFRPVPVRPVVETASSSDDGPATSLSLSLPGVESTEISNRAAAVPVMPLTTVTAPSPAALEVGLGAMNLSSEFMAVMHEMIRKEVRSYMEQQNHQNGMKHFQGMEIEGFRNVSVKRIGISRVDS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0770 295 MobiDBLite consensus disorder prediction 153 167 - -
Aed6g0770 295 CDD SANT 15 57 IPR001005 -
Aed6g0770 295 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Aed6g0770 295 Gene3D - 12 64 - -
Aed6g0770 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 63 IPR017930 -
Aed6g0770 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 114 IPR017930 -
Aed6g0770 295 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Aed6g0770 295 ProSiteProfiles Myb-like domain profile. 8 59 IPR001005 -
Aed6g0770 295 PANTHER MYB TRANSCRIPTION FACTOR 2 263 - -
Aed6g0770 295 SMART sant 12 61 IPR001005 -
Aed6g0770 295 SMART sant 64 112 IPR001005 -
Aed6g0770 295 CDD SANT 67 110 IPR001005 -
Aed6g0770 295 Gene3D - 66 127 - -
Aed6g0770 295 MobiDBLite consensus disorder prediction 137 170 - -
Aed6g0770 295 PANTHER MYB PROTEIN-RELATED 2 263 - -
Aed6g0770 295 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Aed6g0770 295 Pfam Myb-like DNA-binding domain 13 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0770 Aed-Chr6 6839374 6840261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0770 5 294 MYB Transcription Factor Family AT4G37260 51.988 5.06e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed6g0770 Myb_DNA-binding 5.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0770 K09422 - gmx:100806145 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0770 6 6839374 6840261 Aed11g1444 11 18951298 18952188 PCT