Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0765 ATGGGAAACTCATCCAAGGACGATTCCGCCACCTCCGCCGACGCCTCCGCCGGCGACGTCAAGCCCTCCAATTCCGGCGTCTACTCCGACGGCGAGAAAGTCCTCGCCTACCACGGCCCTCGCATCTACGAGGCCAAGGCAAGGCTTCATCTTTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCCATTCCCTTTTGTTCTCTTTCCACGTTTCGTGCAAAAGGCTGAGATCAGAAAGAGTGAATGGAAATACTTTGTTCACTACCTTGGCTGGAGTAAAAATTGGGACGAATGGGTAGGTGAGGAGCGTTTAATGAAACATACTGAAGAGAATGTACTAAAACAGCAGGCCTTAGACAAAAAGCAAAATGCAGAAAAGAATGTTAAATCTGGGCGTTCATCTCAAGCAAAGTCCAAAACCTCTACTGATGCCAAAATGGATAAAGAAGATGTCAAGAATAATGTGTCAAAAGGGAAGAAACGAAAGCATGATGCAGGAGTTGAGAAGGGGAGCGGTACTGTTGAAAAGCTCGTCAAGATTCAAATTCCTGCAACATTAAAGAAACAACTTGTTGATGATTGGGATTCTGTTACTCAGCAGGATAAGCTTGTAAAACTTCCCCGTTCACCAACTGTTGATGAAATTCTGACAAAGTACCTTGAATACAAATCAAAGAAGGATGGCATGGCTCCTGATTCAATAGGAGAAATATTGAAAGGAATAAGGTGTTATTTTGATAAAGCATTGCCTATGATGCTCTTGTACAAAAAAGAACGCAAGCAATATAATGATGCAATTGTGGATAATGTGTCTCCGTCAACCATATATGGAGCTGAACATTTATTACGCCTCTTTGTTAAGTTACCTGAGCTTTTGGCATATGTAACTATTGAGGAGGAAACATTGAATCGCTTGCAGCAGAAATTACTTGACTTCATCAAGTTTTTGCAGAAAAATCAAAGTACCTTCTTTCTTTCAGCATATGATGGCACCAAAGTCTCTGAAGGAAAAGCCTTTGCATCAATATTTATGGGAAACTCTCTGGAAGGAGGCTTGCTTCTTGCCATGTTTAATCTCGCGCATATAGCGGAAGAGTATTTCACCAGCCAATCGATGGTTGATGTTAGAGAGTTGAAAGAAAACAATCCAGATTTCGCCCTTGTACTGGATACCAATGATGATAAACTCCCCAATACATTTGACTTGGCATACAAGAGGGTTCCCGTGCATGATGTAGCTGTAGGATCATATATTCTGGTTGGCGCCGGTGAGTCTGTGCCAGTAGATTGTGAAGTATACCAAGGTGGTGCCACAATTACCATTGAGCACTTGACAGGGGAAGTCAAACCTTTGGAAGCCAAAGTTGGAGATAGAATTCCTGGTGGTGCAAGGAACTTAGATGGGATGATAATTGTGAAGGTAACAAAAACTTGGAAGGAATCAACTCTCAGAAGAATTGTTCAGTTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAACGTTATAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTATTGGGCCATTTTTATTTAAGTGGCCGTTCATTAGTACATCTGCTTGCAGAGGTTCAATTTACAGAGCCTTAGGGCTTATGGTGGCAGCATCCCCTTGTGCCTTGGCTGTGGCCCCATTGGCATATGCTATAGCAATCAGTTCCTGTGCCAGAAAGGGGATATTGCTCAAAGGTGGGCATGTTATGGATGCTCTAGCTTCTTGTCATACTATTGCATTTGACAAAACAGGGACATTGACAACTGGTGGACTCGTATTCAAGGCAATTGAACCCATTTATGGTCATCATGTTAGAAACAATGAATCAATTGTACCTTCCTGTTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACCACTCACCCTATTGGAAGGGCTGTGGTTGATCATAGTGAAGGCAAAGAACTCCCATCTGTTTCTGTTGAAAGTTTCGAATACTTTCCTGGTAGAGGCCTCACTGCTACTGTTAACAGTATTGAGTCAGGAACTGGAGGTGCTAAACTATTGAAAGCATCACTTGGGTCTATAGATTTCATCACCTCTTTTTGTCAATCTGAAGATGAGTCAGAGAAGATCAAGGAAGCTGCTAATACATCTTCTTATGGAAGTGAATATGTTCATGCTGCCCTTTCAGTTAATCAGAAGGTGATAACATTGATTCATCTAGAGGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGATCACGAGTCTAGTGCAAGGAGAGTTGCAAGTGCTGTGGGCATCAATGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGCTGAGTCATGTGAAGGATATCTCAAGAGATATGGGGGGAGGCTTAGTTATGGTTGGTGAAGGCATCAATGATGCCCCAGCACTAGCTGCTGCAACTGTTGGGATAGTTCTTGCTCACCGTGCTAGTGCAACTGCCATAGCTGTTGCAGATGTATTGTTGCTTAGAGAAAACATCTCTGCAGTGCCATTTTGTATTGCCAAGTCTCGCCAAACAACTTCATTGATTAAACAAAATGTGGCTTTAGCATTGACGTCCATTATCCTGGCTTCCCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTCTGTCTCAACTCCGTACGTGCTCTGAATGAACCATCTTGGTCCTGGAAGCATGATATATCACATTTGATTAGCAACATTAAATCTAGACTCGTGTCTCTCAAGACAAATATCACGGACTCATCAAACATCATAACGGCCAATTTGTAA 2919 0.4251 MGNSSKDDSATSADASAGDVKPSNSGVYSDGEKVLAYHGPRIYEAKARLHLSPLSLSLSLSFPFPFVLFPRFVQKAEIRKSEWKYFVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNAEKNVKSGRSSQAKSKTSTDAKMDKEDVKNNVSKGKKRKHDAGVEKGSGTVEKLVKIQIPATLKKQLVDDWDSVTQQDKLVKLPRSPTVDEILTKYLEYKSKKDGMAPDSIGEILKGIRCYFDKALPMMLLYKKERKQYNDAIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFIKFLQKNQSTFFLSAYDGTKVSEGKAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSQSMVDVRELKENNPDFALVLDTNDDKLPNTFDLAYKRVPVHDVAVGSYILVGAGESVPVDCEVYQGGATITIEHLTGEVKPLEAKVGDRIPGGARNLDGMIIVKVTKTWKESTLRRIVQLTEEAQSNKPKLQRWLDEFGERYSKVVVVLSIAIAVIGPFLFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGHVMDALASCHTIAFDKTGTLTTGGLVFKAIEPIYGHHVRNNESIVPSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKELPSVSVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSFCQSEDESEKIKEAANTSSYGSEYVHAALSVNQKVITLIHLEDRPRPGVFNVIQELQDEAKFRVMMLTGDHESSARRVASAVGINEFHCNLKPEDKLSHVKDISRDMGGGLVMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALTSIILASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNEPSWSWKHDISHLISNIKSRLVSLKTNITDSSNIITANL 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0765 972 MobiDBLite consensus disorder prediction 142 169 - -
Aed6g0765 972 SFLD p-type atpase 579 881 IPR044492 -
Aed6g0765 972 ProSitePatterns E1-E2 ATPases phosphorylation site. 599 605 IPR018303 -
Aed6g0765 972 PRINTS P-type cation-transporting ATPase superfamily signature 597 611 - -
Aed6g0765 972 PRINTS P-type cation-transporting ATPase superfamily signature 852 864 - -
Aed6g0765 972 PRINTS P-type cation-transporting ATPase superfamily signature 828 847 - -
Aed6g0765 972 PRINTS P-type cation-transporting ATPase superfamily signature 751 762 - -
Aed6g0765 972 PRINTS P-type cation-transporting ATPase superfamily signature 774 784 - -
Aed6g0765 972 Pfam E1-E2 ATPase 405 577 - -
Aed6g0765 972 SUPERFAMILY Chromo domain-like 74 199 IPR016197 -
Aed6g0765 972 SFLD Haloacid Dehalogenase 579 881 - -
Aed6g0765 972 SUPERFAMILY HAD-like 595 928 IPR036412 -
Aed6g0765 972 MobiDBLite consensus disorder prediction 1 23 - -
Aed6g0765 972 MobiDBLite consensus disorder prediction 117 169 - -
Aed6g0765 972 SUPERFAMILY Calcium ATPase, transmembrane domain M 339 913 IPR023298 -
Aed6g0765 972 Gene3D - 590 879 IPR023214 -
Aed6g0765 972 MobiDBLite consensus disorder prediction 1 27 - -
Aed6g0765 972 Pfam haloacid dehalogenase-like hydrolase 595 841 - -
Aed6g0765 972 ProSiteProfiles MRG domain profile. 175 342 IPR026541 -
Aed6g0765 972 Gene3D - 369 495 - -
Aed6g0765 972 Gene3D - 12 135 - -
Aed6g0765 972 Gene3D - 608 759 IPR023299 GO:0000166
Aed6g0765 972 Pfam MRG 169 329 IPR026541 -
Aed6g0765 972 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 339 959 - -
Aed6g0765 972 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 339 930 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aed6g0765 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 728 908 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed6g0765 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 356 621 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed6g0765 972 CDD P-type_ATPase_HM 344 930 - -
Aed6g0765 972 Pfam RNA binding activity-knot of a chromodomain 75 105 IPR025995 -
Aed6g0765 972 Gene3D MRG domain 176 341 IPR038217 -
Aed6g0765 972 SUPERFAMILY Calcium ATPase, transduction domain A 405 490 IPR008250 -
Aed6g0765 972 SMART chromo_7 27 121 IPR000953 -
Aed6g0765 972 CDD CBD_MSL3_like 32 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0765 Aed-Chr6 6795223 6814451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0765 339 953 Primary Pumps ATPases AT4G37270 79.024 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0765 K01534 - gmx:100776309 1160.21