Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0752 ATGACCTTCACCAGAGAGGATGATGAAGTTGATCATGATCATGATCATGTGGATAGTGGAATATCACAAAACAATGGCAACACTGATGAAATTGTGACCCCCCCAGAAGGGGAAAACTTAGGAGAATGGCTTAGTCTAAGCCTCAAAGGTGACATCATGCCTCTGGAAGAAGCATCAGCAGAACAATTAAACTCATCATCAACATCATCAAGGCCTCTTCACCACAACAAGGTGTTCTCATGCAACTTCTGCATGAGAAAGTTCTACAGTTCACAAGCCTTAGGGGGCCACCAGAATGCACACAAGAGGGAGAGAGAAGCAGCTAGAAGCTACCACCAATCTCACAACAAGATGATGGGACTTGCATACACTTCTCTGGCATCTAGGTCACTGGGAATTCAGCCTCACTCTCTTGTGCACAAGCCCAACAGAGAAAGGTCTGCTATGGTGGCCAAATTCAGCACTGATGCCAATAATAATAACAACACTACTTATAATTATGGGGTTTCATCATCATCATCATCATGGACAACACCCTTTATGCTTGAACAAGCTGTGGATTATTTCTATTGGCCTGGTAGCTTTAGGGTGGACTTGCCAAAGCAAGATTCATCATCAGATGTTAAGAAGATTGACTTAGATCTTCGGCTCTGA 654 0.4358 MTFTREDDEVDHDHDHVDSGISQNNGNTDEIVTPPEGENLGEWLSLSLKGDIMPLEEASAEQLNSSSTSSRPLHHNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYHQSHNKMMGLAYTSLASRSLGIQPHSLVHKPNRERSAMVAKFSTDANNNNNTTYNYGVSSSSSSWTTPFMLEQAVDYFYWPGSFRVDLPKQDSSSDVKKIDLDLRL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0752 217 MobiDBLite consensus disorder prediction 1 19 - -
Aed6g0752 217 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Aed6g0752 217 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Aed6g0752 217 Gene3D Classic Zinc Finger 57 131 - -
Aed6g0752 217 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 217 - -
Aed6g0752 217 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Aed6g0752 217 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 217 - -
Aed6g0752 217 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0752 Aed-Chr6 6669277 6669930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0752 61 196 C2H2 Transcription Factor Family AT1G24625 39.007 9.93e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0752 - - gmx:100795890 276.559