Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0748 ATGTCTCGGAGCTCCCAAGAGCAGCCACTGTTAGCGGACTCGTTTATAGAAGACGAGCCGCAGGAAACAGCCTACGACTCTTCCGAGAAGATCGTCGTTGTCGGACTTGATGAGTCCGACGACGACAACTGGGGGCGAGTGCCCCCATTCTCTTGGAAGAAGCTATGGCTGTTTACTGGGCCGGGCTTTTTAATGAGCATAGCGTTTCTGGACCCGGGGAACTTGGAAGGGGACCTTCAGGCGGGTGCCATTGCGGGCTACTCGCTGCTGTGGCTTCTCTTGTGGGCCACAGCTATGGGCCTCCTGATCCAGCTCCTCTCGGCGCGGCTCGGCGTGGCCACGGGGAAGCACCTCGCCGAGCTCTGCCGAGAGGAGTATCCGCCGTGGGCCCGGATAGTGCTCTGGGTCATGGCGGAGCTCGCTCTCATTGGCTCCGATATTCAGGAGGTTATTGGGAGCGCCATTGCTATCAGGATTCTTAGTCATGGAGTTATTCCCCTTTGGGCTGGGGTCGTTATCACAGCTCTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGACATTGGAAGCTTTTTTTGCTGTTCTCATTGGTGTGATGGCAATCTCGTTTGCATGGATGTTTGGTGAAGCCAAGCCCAGTGGCAAGGAACTGCTTCTTGGTGTTTTGATTCCAAAACTCAGCTCCAAAACTATACAACAAGCTGTTGGAGTTGTGGGGTGCCTTATTATGCCTCACAATGTGTTCTTGCACTCTGCACTTGTTCAGTCAAGGCAAGTTGACCGCAGCAAGAAAGGCCGGGTTCAAGAAGCTCTTAACTATTACTCTATAGAATCCACCATTGCCCTTGTAGTCTCCTTCATCATAAACATATTTGTCACAGCAGTGTTTGCTAAGGGCTTCTATGGTTCTCAACTTGCAAACAGCATTGGTCTTGTAAATGCAGGACAGTATCTTGAGGAGACATATGGGGGTGGAGTGTTTCCAATTTTATACATATGGGGTATAGGGTTATTAGCAGCAGGCCAAAGTAGCACTATTACTGGCACTTATGCTGGACAATTCATCATGGGGGGGTTTCTAAATTTAAGGTTAAAGAAGTGGACGAGGGCATTGATTACCCGAAGTTGTGCAATTATTCCAACCATGATAGTTGCTCTTATATTTGATACCTCAGAGGACTCACTGGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTCCAGATCCCCTTTGCACTTATTCCCTTGCTTTGTCTTGTGTCAAAGGAGCAGATAATGGGCACTTTCAGAATTGGTGCTTTCCTCAAGACTATTTCATGGCTTGTGGCTGCTCTGGTGATAGTGATTAATGGCTATCTTCTGTCAGAATTCTTTTCCTCTGAAGTGAATGGACCAATGATTGGTGCTGTGGTGGGTGTAATAACTGCTGCATATGTTGCATTCGTAATTTACCTTATTTGGCAAGCCATCACCTATTTACCTTGGCAAAAAAGTGTCACAAAACCAAAGGCAATTGCTCCCTCTGAGGGTTTTGAGTAA 1554 0.4768 MSRSSQEQPLLADSFIEDEPQETAYDSSEKIVVVGLDESDDDNWGRVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLLWATAMGLLIQLLSARLGVATGKHLAELCREEYPPWARIVLWVMAELALIGSDIQEVIGSAIAIRILSHGVIPLWAGVVITALDCFIFLFLENYGVRTLEAFFAVLIGVMAISFAWMFGEAKPSGKELLLGVLIPKLSSKTIQQAVGVVGCLIMPHNVFLHSALVQSRQVDRSKKGRVQEALNYYSIESTIALVVSFIINIFVTAVFAKGFYGSQLANSIGLVNAGQYLEETYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWTRALITRSCAIIPTMIVALIFDTSEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFRIGAFLKTISWLVAALVIVINGYLLSEFFSSEVNGPMIGAVVGVITAAYVAFVIYLIWQAITYLPWQKSVTKPKAIAPSEGFE 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0748 517 Pfam Natural resistance-associated macrophage protein 76 437 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 13 512 - -
Aed6g0748 517 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 53 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 Hamap Divalent metal cation transporter MntH [mntH]. 38 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 189 210 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 134 160 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 164 183 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 373 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 238 261 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 407 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PRINTS Natural resistance-associated macrophage protein signature 345 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed6g0748 517 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 13 512 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0748 Aed-Chr6 6628575 6632854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0748 30 500 Inorganic Solute Cotransporters AT2G23150 79.368 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0748 K21398 - gmx:547711 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1451 11 19007655 19011788 Aed6g0748 6 6628575 6632854 PCT