Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0735 ATGTGTAAATTTTATCGCTGCTACACACGCATTAAATACGAGCACGAAGCGCCAGCACTAGTTCTCCGCTTCTTGCTAGTTTGCACTCTTGTCGCCTTGCGTGCGCCGGTTGCGCAGCCTCCTATCGTGCGCATCTCCAATAATCAGCACCAGCACCAGCACCACCTCATCGAAACTAACTCCATCATCACAATCGTTCACCAGATCTCGGGTTCCACTTCCAATCATCATCGCCGCCGAGCCATGTCGAAGGCGCGTGTCTACACCGACGTCAATGTTCTTCGCCCCAAGGAGTACTGGGATTACGAGTCCCTCACCGTTCAATGGGGTGACCAAGATGATTATGAGGTTGTGCGAAAAGTGGGAAGGGGGAAGTATAGTGAGGTTTTTGAAGGCATAAATGTAAATAGCAATGAGCGCTGTATAATCAAGATTCTCAAGCCTGTCAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTTTGTGGGGGCCCAAATGTTGTCAAGCTTCTTGATATTGTTAGAGATCAACACTCTAAAACTCCTAGCCTAATATTTGAGTATGTCAACAGTACAGATTTTAAAGTTTTGTATCCAACCTTGACTGACTACGACATACGCTATTACATATATGAGCTTCTTAAGGCCTTAGACTACTGTCATTCTCAAGGCATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGATCACGAATTACGGAAACTTCGCTTGATAGATTGGGGTCTTGCCGAATTTTATCATCCTGGAAAGGAATACAATGTTCGTGTGGCTTCAAGATACTTTAAGGGCCCTGAACTTCTAGTTGATTTACAAGACTATGACTACTCATTAGACATGTGGAGTCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCTTTTATGGTCACGACAACCATGATCAGCTTGTCAAAATAGCTAAGGTAACATTTATGGCGGTTCAGCACAGTCGGAAGCCTTGGTCTAAATTTATCAATCCAGATAATCAGCATCTTGTGTCTCCTGAGGCAATTGATTTTCTTGATAAACTCCTTCGATACGATCACCAGGACAGGCTAACAGCAAGAGAAGCAATGGCACATCCATATTTCTCTCAAGTAAGGGCAGCTGAAAGTAGCAGAATGAGGACACAGTAG 1182 0.4315 MCKFYRCYTRIKYEHEAPALVLRFLLVCTLVALRAPVAQPPIVRISNNQHQHQHHLIETNSIITIVHQISGSTSNHHRRRAMSKARVYTDVNVLRPKEYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNVVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVTFMAVQHSRKPWSKFINPDNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRTQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0735 393 Pfam Protein kinase domain 115 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0735 393 PANTHER CASEIN KINASE II SUBUNIT ALPHA 330 393 IPR045216 GO:0004674|GO:0006468
Aed6g0735 393 Gene3D Phosphorylase Kinase; domain 1 101 191 - -
Aed6g0735 393 Gene3D Transferase(Phosphotransferase) domain 1 201 393 - -
Aed6g0735 393 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Aed6g0735 393 SUPERFAMILY Protein kinase-like (PK-like) 86 383 IPR011009 -
Aed6g0735 393 SMART serkin_6 115 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0735 393 ProSiteProfiles Protein kinase domain profile. 115 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0735 393 PANTHER CASEIN KINASE II SUBUNIT ALPHA 17 324 IPR045216 GO:0004674|GO:0006468
Aed6g0735 393 PANTHER CASEIN KINASE II SUBUNIT ALPHA-3 330 393 - -
Aed6g0735 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Aed6g0735 393 CDD STKc_CK2_alpha 96 379 IPR045216 GO:0004674|GO:0006468
Aed6g0735 393 PANTHER CASEIN KINASE II SUBUNIT ALPHA-3 17 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0735 Aed-Chr6 6498596 6504135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0735 113 382 Core Cell Cycle Gene Families AT3G48750 31.633 1.81e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Aed6g0735 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0735 K03097 - gmx:100819679 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1467 11 19101239 19106101 Aed6g0735 6 6498596 6504135 PCT