Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0730 ATGGGTCGGCTTAATCTCCTACTCGTGTGGTCACTCTCATTATTATCACTGTCCCTTTATCTATACCCAACCTCTGCACAGCTCAGCCCAAACCACTATTCCAACACATGCCCCAATCTTCAAAGCATCGTTAGACAGGCCGTTACCAAGAAGTTCCAACAAACCTTTGTCACTGGTTGCGATGCTTCGGTTCTGATTGCATCCAGCGGAGGTAACCAGGCAGAGAAGGATCACCCAGACAATCTGTCTTTGGCGGGTGATGGGTTTGACACAGTGATCAAAGCAAAGGCTGCAGTAGATGCTGTTCCTCAGTGCAGGAACAAGGTTTCGTGTGCTGATATTCTCGCCTTGGCCACCCGTGATGTTATTGTGCTGCCAACGAACAATTTGAACCAGCTCAATTCTCTGTTTGCAGCAAACGGTCTCACCCAAACTGATATGATTGCTCTCTCAGGTGCACACACCCTTGGATTCTCCCACTGCAGCAAGTTCTCGAGCAGAATCTACAGCTCCCCAGTGGACCCCACACTGAACAAGCAATACGTAACCCAATTGCAACAAATGTGCCCAAGAAACGTGGATCCTAGGATCGCCATCAACATGGACCCAACCACTCCAAGAACATTCGACAATGTTTATTACCAAAACCTTCAACAAGGAAAGGGTCTCTTTACCTCGGACCAAATCCTCTTCACGGACACAAGGTCCCGGAACACTGTCAATTCCTTCGCTTCCAGCTCCAGCGTTTTCAACTCCAACTTCGTCGCGGCCATGACCAAATTGGGTCGCGTTGGTGTCAAGACCGCTAGAAACGGCAAGATTCGCACTGATTGTTCTGTGCTTTAA 846 0.4882 MGRLNLLLVWSLSLLSLSLYLYPTSAQLSPNHYSNTCPNLQSIVRQAVTKKFQQTFVTGCDASVLIASSGGNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIVLPTNNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCSKFSSRIYSSPVDPTLNKQYVTQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYQNLQQGKGLFTSDQILFTDTRSRNTVNSFASSSSVFNSNFVAAMTKLGRVGVKTARNGKIRTDCSVL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0730 281 PANTHER - 2 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PANTHER - 127 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PANTHER PEROXIDASE 2 125 - -
Aed6g0730 281 PANTHER PEROXIDASE 127 281 - -
Aed6g0730 281 Gene3D - 32 125 - -
Aed6g0730 281 ProSitePatterns Peroxidases proximal heme-ligand signature. 146 156 IPR019793 -
Aed6g0730 281 Gene3D Peroxidase, domain 2 126 261 - -
Aed6g0730 281 PRINTS Plant peroxidase signature 256 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PRINTS Plant peroxidase signature 216 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PRINTS Plant peroxidase signature 200 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PRINTS Haem peroxidase superfamily signature 109 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 CDD secretory_peroxidase 27 280 IPR033905 GO:0004601|GO:0042744
Aed6g0730 281 ProSiteProfiles Plant heme peroxidase family profile. 27 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 Pfam Peroxidase 126 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 Pfam Peroxidase 48 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0730 281 Gene3D - 262 280 - -
Aed6g0730 281 SUPERFAMILY Heme-dependent peroxidases 27 280 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0730 Aed-Chr6 6449848 6453119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0730 1 281 Peroxidase AT5G67400 56.535 5.84e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0730 K00430 - gmx:100819937 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0730 6 6449848 6453119 Aed11g1471 11 19127416 19129812 PCT