Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0727 ATGAGTTGCAACGGGTGCCGCGTTCTTCGAAAGGGATGCAGCGAGTCCTGTGTGCTGCGACCTTGTTTGCAGTGGATCGAAACCGCTGAAGCTCAAGGCCACGCCACGGTCTTCGTTGCCAAATTCTTTGGCCGCGCTGGCCTCATGTCCTTCATTTCCAACGTTCCAGAAAATCAAAGACCTGCTCTGTTTCAGTCGCTGCTGTTCGAAGCGTGCGGCAGAACGGTGAACCCCGTGAACGGCGCCGTGGGACTCCTCTGGACCGGAAACTGGCACGTGTGCCAGGCGGCGGTGGAGACCGTGCTCCGCGGCGGGACACTTAGGGCCCTACCGGAGCTCATCGGTCTCGACGCTCCCGCCGTTACCGCCACCACCGCCGCCGACGAAGCGTCGGAGGCGGAAGTCGGCTGCACCGGCACGTGGAGGATCCGAGATCGGAACCCTAATTGCAGGTTCACAAGCTCGCGATCTCTTAATAAGATCTCCTCCTCCTCTGGCGGCGGCGGCGGCAAGCGCAAGCGGCCGGAGGAGCTCGTGAAGCTTCAGGCGGCGGCGCCGAATCTCGATCTCCGGCTGACGCCGGTCTTTTTGCAGAAGGTCGAGAGTCGGCGGCCGGAGTCGCCGTCGATGACATCGGAGGAGTCCGGCACGACGACGGAGAACAGATTTGGGGATCAGTGGGGTCAACGGAAAGTTCTCAACCTTTTCATTTGA 714 0.6134 MSCNGCRVLRKGCSESCVLRPCLQWIETAEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRALPELIGLDAPAVTATTAADEASEAEVGCTGTWRIRDRNPNCRFTSSRSLNKISSSSGGGGGKRKRPEELVKLQAAAPNLDLRLTPVFLQKVESRRPESPSMTSEESGTTTENRFGDQWGQRKVLNLFI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0727 237 MobiDBLite consensus disorder prediction 209 224 - -
Aed6g0727 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 237 - -
Aed6g0727 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 237 - -
Aed6g0727 237 MobiDBLite consensus disorder prediction 201 224 - -
Aed6g0727 237 MobiDBLite consensus disorder prediction 154 174 - -
Aed6g0727 237 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Aed6g0727 237 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0727 Aed-Chr6 6412785 6415096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0727 1 236 AS2 family AT3G49940 57.812 3.15e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed6g0727 LOB 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0727 - - gmx:100818328 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0727 6 6412785 6415096 Aed11g1472 11 19136860 19138395 PCT