Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0724 ATGGCCTTGAGGCCCTTCTTCCATTTCAACTTCTCCTCGCGCGATAGTTTGCTCTCTCTCCTCCTCTCTCATTCTCATTCCCTTCCCTCTCCTCTCCGTTCCCCCCAAACTCTTCCTCCCTCTTTCTCCCTCCGCCGCTTCTCCGCCGCCCCTCTCGCCCGCTCTCCTCCTCCTCCTCCGCCGCCGCTCCTCGACGCCATGGCGCAGAAAATCGGCAAGTCCACGCGCCGCCCCGGCGCCTCCTCCAAGTCCCGCGTCTACGCCGACGTCAACGTCGTTCGCCCCAAGGAATATTGGGACTACGAGTCCCTCAACGTCCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTGTTCGAAGGTGTTCACTGCACGGACGGTGAAAAATGCGTCATCAAGATCCTGAAACCCGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATACTACAGAATCTTTGTGGAGGGCCTAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCGAAGACCCCAAGTCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTATCCTACATTGTCGGACTATGATATACGATATTATATTTATGAACTTCTGAAGGCAATTATTTGGAATTTCTGCCAGGCACTGGATTATTGTCATTCACAAGGAATCATGCATCGTGATGTGAAACCACATAATGTAATGATTGATCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTCCGTGTGGCTTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATGATATTCCGTAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATTGCCAAGGTACTTGGGACAGATGAATTAAGTGCATATTTAGATAAGTATCGAATAGAGTTGGACCCACATCTTGCAGCACTTATCGGGAGGCATGGCCGCAAGCCATGGGCAAAGTTCATTAATGTAGAAAATCATCACTTGGCTGTTCCTGAGGCCATTGACTTTGTTGACAAGTTACTACGCTATGATCACCAAGACCGTCCCACTGCAAAAGAAGCCATGGCCCATCCATACTTCATTCCAATTAGAAATGCAGAGAGTAGTAGAACTCGTGCACATTGA 1266 0.4668 MALRPFFHFNFSSRDSLLSLLLSHSHSLPSPLRSPQTLPPSFSLRRFSAAPLARSPPPPPPPLLDAMAQKIGKSTRRPGASSKSRVYADVNVVRPKEYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDGEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKAIIWNFCQALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLDKYRIELDPHLAALIGRHGRKPWAKFINVENHHLAVPEAIDFVDKLLRYDHQDRPTAKEAMAHPYFIPIRNAESSRTRAH 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0724 421 SUPERFAMILY Protein kinase-like (PK-like) 84 411 IPR011009 -
Aed6g0724 421 Pfam Protein kinase domain 114 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0724 421 PANTHER CASEIN KINASE II SUBUNIT ALPHA 65 413 IPR045216 GO:0004674|GO:0006468
Aed6g0724 421 ProSiteProfiles Protein kinase domain profile. 114 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0724 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Aed6g0724 421 Gene3D Transferase(Phosphotransferase) domain 1 191 407 - -
Aed6g0724 421 Gene3D Phosphorylase Kinase; domain 1 114 190 - -
Aed6g0724 421 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Aed6g0724 421 PANTHER BNAA04G13490D PROTEIN 65 413 - -
Aed6g0724 421 CDD STKc_CK2_alpha 95 407 IPR045216 GO:0004674|GO:0006468
Aed6g0724 421 SMART serkin_6 114 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0724 Aed-Chr6 6390393 6396762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0724 112 407 Core Cell Cycle Gene Families AT1G76540 29.773 1.62e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Aed6g0724 Pkinase 2.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0724 K03097 - gmx:100776388 697.967