LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g0714	ATGGATACCTTGTTTAGACTAGTAAGTTTCCATCAGCAACAACAACAACCCAATCCTTCATCCCTGAACTCCACCACCAGCAGAACCTCCAGCAGCTCCAGATCCTCCCGACAAAACTACTACCCTTATCAAGAAGAAGAAGAATGCTTCAACAACTTTTACATGGATGAAGAAGACCTCTCCTCGTCTTCTTCCAAACACTATTACCCTTACCAACAACAACAACAACAACAACAACCCCATCACAACGTTTCTACAAACACCTTCAGCACCACCACCAACACTGATAATTACTCCTACTCATTCTCCCCCACCCCGCCTCCCCCGCCGCCACAACAAGTACTTCCTGAATTCATCAACTTCGAATTCTCCTCCCCAAACTGGTCCCATAGCCTCCTCCTCGAATCCGCACGCGCCCTCTCCGACAACAACAGTACGCGCCTCCACCACCTCCTCTGGATGCTCAACGAGCTCAGCTCCCCCTACGGCGACACCGACCAAAAACTCGCCGCGTACTTCCTCCAAGCCCTCTTCAGCCGCGTCACCGAAGCTGGCCACCGAACCTACCGAACCTTAGCTTCGGCGTCAGAGAAAACATGCTCATTCGAGTCAACAAGGAAGACCGTCTTGAAATTCCAAGAGGTTAGCCCCTGGACAACCTTCGGACACGTGGCGTCCAACGGCGCGATTCTGGAGGCGTTAGACGGAAACGCGAAACTTCACATAGTTGACATCAGCAACACGTATTGCACTCAATGGCCGACTCTTCTAGAAGCGTTGGCGACTCTTCATGAAACGCCGCATCTGAAACTAACAACTGTGGTGATGACTGGAAGAACCGGTGGCTCGGTTCAGCGCGTGATGAAGGAAATCGGAACGAGAATGGAAAAATTCGCGAGACTCATGAGAGTTCCGTTTAAGTTCAACGTTGTGCATCACTACGGAGATCTATCGGAGTTCAATTTCTCAGAACTCGATTTGAAAGACGACGAGGCGTTAGCGATAAACTGCGTGAACGCGCTGCATTCTGTTTCCGCGGCGGGGAACAACCGCGACGCGTTGATATCGGCGCTGGCGTCGCTGCAGCCGCGGATCGTGACGGTGGTGGAGGAGGAGGCGGATCTTGACGTCGGAAACGACGGCTACGAGTTCGTGAAAGGATTCGAAGAGTGTTTGAGGTGGTTTAGGGTTTACTTCGATGCTTTGGACGACAGTTTCGTGAAGACGAGCAACGAGAGGCTAATGCTGGAGCGCACGGCGGGGCGGGCGGTGGTGGACCTCATCGCATGCTCGCCGGCGGACTCCGTGGAGCGGCGCGATACGGCGGCGCGGTGGACGGCGCGGCTTCACAGCGGAGGGCTGAGCGCCGCGCCGTTCAGTGAGGAGGTTTGCGACGACGTGAGGGCGCTGCTGAGGAGGTACAAGGATGGGTGGTCCATGGCGGCGTGCTCCGACGCCGGAATATTCCTCTCGTGGAAGGAAACTCCGGTGGTGTGGGCCAGTGCATGGAGGCCATAA	1518	0.5481	MDTLFRLVSFHQQQQQPNPSSLNSTTSRTSSSSRSSRQNYYPYQEEEECFNNFYMDEEDLSSSSSKHYYPYQQQQQQQQPHHNVSTNTFSTTTNTDNYSYSFSPTPPPPPPQQVLPEFINFEFSSPNWSHSLLLESARALSDNNSTRLHHLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTEAGHRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALDGNAKLHIVDISNTYCTQWPTLLEALATLHETPHLKLTTVVMTGRTGGSVQRVMKEIGTRMEKFARLMRVPFKFNVVHHYGDLSEFNFSELDLKDDEALAINCVNALHSVSAAGNNRDALISALASLQPRIVTVVEEEADLDVGNDGYEFVKGFEECLRWFRVYFDALDDSFVKTSNERLMLERTAGRAVVDLIACSPADSVERRDTAARWTARLHSGGLSAAPFSEEVCDDVRALLRRYKDGWSMAACSDAGIFLSWKETPVVWASAWRP	505

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aed6g0714	505	MobiDBLite	consensus disorder prediction	8	42	-	-
Aed6g0714	505	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	1	504	IPR005202	-
Aed6g0714	505	ProSiteProfiles	GRAS family profile.	120	504	IPR005202	-
Aed6g0714	505	PANTHER	PROTEIN SHORT-ROOT	1	504	IPR030019	GO:0003700\|GO:0005634\|GO:0008356\|GO:0009956\|GO:0043565\|GO:0048366
Aed6g0714	505	Pfam	GRAS domain family	131	504	IPR005202	-
Aed6g0714	505	MobiDBLite	consensus disorder prediction	63	90	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g0714	Aed-Chr6	6278389	6279906	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed6g0714	1	505	GRAS Transcription Factor Family	AT4G37650	57.353	0.0	553

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Aed6g0714		GRAS	1.1e-98	CL0063

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g0714	-		-	gmx:100814082	774.237

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed11g1487	11	19255893	19257326	Aed6g0714	6	6278389	6279906	PCT

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