Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0708 ATGGGTGCTCCCAAGCAGAAATGGATTGCGGAAGAAGAAGCGGCGCTGAAATCTGGAGTACTCAAACATGGGGCAGGAAAATGGCGCACCATACTTACAGATCCTGAGTTCAGTTCCATTTTGCGCATGCGCTCAAATGTAGATCTTAAGGATAAATGGAGGAATATAAATGTGACGGCAATATGGGGATCTCGGCAGAAGGCAAAGCTTGCTTTAAGGAACCCACCAGCCCCCAACATTGACAGTAATCAGCTGGCATTGAGTACCGTCATTCGACATGATGAAGTTCTTGATACTATGCCCTTGGCAGTTTCCGGTGGACCATTGCAATCTCCCAATTTGAAAGAACAAATATCAAGGTTACTGAAGATCAAGTTGGTGGATAATCATATATTAGAGGCCATTGTCAACATGAAGGAGCAAAAGGGTTCTGACAAGGCTGCCATTGCTTCTTTCATCGAGGAAAAATATCAGTCTCCACCAAATCTCAGTAAATTACTGTCAACCAAACTGAAGCATATGGTGGCAAGTGGCAAAATAATCAAGGAAAAGCGTAAGTACAGGATTGCGCCAAGTTCAACAGTCTTCGAGAAAAGAAGAAGCTCTTCATTGTTACTTTTGGATGGGAGGCCCAAGGATCCTTCAGAAGCACATAAGAATGATCATGTCAACATCCTTTCAAAATCCCAAATTGATGCAGAGATATCAAAAGTGAAGGGCTTGACAGCTCAAGAGGCAGCTGCTGTGGCTGCAAAAGCGGTTGTAGAGGCAGAGGCTGCAATTGAACAGGCTGAGGCAGCAGCTAGGGAGGCTGATGCTGCAGAAGTTGAAGCTGAGGCTGCTCAAGTGTTTGCAAAAGCAGCAATGAAGGCACTAAAATGCAAAATGCTTCAGATTTGGTAG 903 0.4463 MGAPKQKWIAEEEAALKSGVLKHGAGKWRTILTDPEFSSILRMRSNVDLKDKWRNINVTAIWGSRQKAKLALRNPPAPNIDSNQLALSTVIRHDEVLDTMPLAVSGGPLQSPNLKEQISRLLKIKLVDNHILEAIVNMKEQKGSDKAAIASFIEEKYQSPPNLSKLLSTKLKHMVASGKIIKEKRKYRIAPSSTVFEKRRSSSLLLLDGRPKDPSEAHKNDHVNILSKSQIDAEISKVKGLTAQEAAAVAAKAVVEAEAAIEQAEAAAREADAAEVEAEAAQVFAKAAMKALKCKMLQIW 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0708 300 SMART h15plus2 127 186 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aed6g0708 300 PANTHER SINGLE MYB HISTONE 4 1 299 IPR044597 GO:0003691
Aed6g0708 300 Gene3D - 2 59 - -
Aed6g0708 300 PANTHER MYB TRANSCRIPTION FACTOR 1 299 - -
Aed6g0708 300 CDD SANT_TRF 6 57 - -
Aed6g0708 300 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 117 191 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aed6g0708 300 Pfam linker histone H1 and H5 family 131 184 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aed6g0708 300 Gene3D - 125 201 IPR036388 -
Aed6g0708 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Aed6g0708 300 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Aed6g0708 300 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Aed6g0708 300 SUPERFAMILY "Winged helix" DNA-binding domain 127 199 IPR036390 -
Aed6g0708 300 Coils Coil 247 281 - -
Aed6g0708 300 SUPERFAMILY Homeodomain-like 2 62 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0708 Aed-Chr6 6236704 6240348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0708 1 296 Single Myb Histone (SMH) Gene Family AT5G67580 52.159 2.83e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0708 K09422 - gmx:100779583 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1491 11 19274750 19279148 Aed6g0708 6 6236704 6240348 PCT