Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0702 ATGTCTTTCGACTCCTCAAACTCGAACAAAAACCACCCAACAACTCCTGACTTGTACTGCAATGAAGTAACGAGTGAAGTGATTAACTTGGATTCCGATGATGATGATGATGATGAGGCTTCGAAGTTCAATAATGTTCTATGGGGTGGAGACTCTGATCACAATAATCATTATGACAGTTATGATGAAAGCTGTCTATTGAGCTTGTTAGAATCCGAGAATGCCCAACCACAGGAACAAACAAAGTTCCTAGGACAACTTCGCAAAAAAACATGGCTGATTAATGCTCGAGAAGAGGCCATAAATTGGATCCTAAAGGTTCATGCTTACTACAGTTTCAAACCCGAGACAGCATATCTTTCTGTAAATTACCTCGATCGTTTCCTCTTGTCACACACCTTGAAGTGCGCATTTCAATATAAATCTAACCGAAGAAAACAAAATGATCATAATTTTTGCGTCAAACGTACTTTTGCAACGCAAGATAAAACATGGTCTCTGCAGCTGTTATCAGTGGCTTGTCTTTCACTAGCAGCAAAATTGGAAGAAACCAAGGTGCCACTTCTTTTGGACCTGCAAGTGATCGAGTCCAGGTTCTTGTTTAAGCCCAAAACAGTTCAGAGGATGGAGCTTTTGGTTATGGCCAGTCTCAAGTGGCGATTGCGTACTATAACCCCTTTTGATTTTGTCCATCTTTTCCTTTCCAAGCTTTCATGCTCTGCTTCCACATGGGGTGATTTGAGTTACATTGTTTCTCGTGTCTCAGATGAGATGGTGCGAAAATGTTACAAACTAATGAAGCAGAAACTGATAATTCGCCAAACAGAACTTTATTATCCAAAGACTTCACAATTATTGCCACGAAGTCCCACTTGTGTGCTTGATCATCATGCAGCTATGCAAGAAAGCAGCAGCGATGATGCTCACAAACAAGCTCTGACTTGA 945 0.4085 MSFDSSNSNKNHPTTPDLYCNEVTSEVINLDSDDDDDDEASKFNNVLWGGDSDHNNHYDSYDESCLLSLLESENAQPQEQTKFLGQLRKKTWLINAREEAINWILKVHAYYSFKPETAYLSVNYLDRFLLSHTLKCAFQYKSNRRKQNDHNFCVKRTFATQDKTWSLQLLSVACLSLAAKLEETKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRTITPFDFVHLFLSKLSCSASTWGDLSYIVSRVSDEMVRKCYKLMKQKLIIRQTELYYPKTSQLLPRSPTCVLDHHAAMQESSSDDAHKQALT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0702 314 Gene3D - 69 79 - -
Aed6g0702 314 Gene3D - 223 245 - -
Aed6g0702 314 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 8 135 - -
Aed6g0702 314 PANTHER CYCLINS 160 261 IPR039361 -
Aed6g0702 314 SUPERFAMILY Cyclin-like 56 221 IPR036915 -
Aed6g0702 314 CDD CYCLIN 97 214 IPR013763 -
Aed6g0702 314 Gene3D - 80 134 - -
Aed6g0702 314 Gene3D - 163 222 - -
Aed6g0702 314 Pfam Cyclin, N-terminal domain 152 221 IPR006671 -
Aed6g0702 314 Pfam Cyclin, N-terminal domain 70 134 IPR006671 -
Aed6g0702 314 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
Aed6g0702 314 PANTHER CYCLINS 8 135 IPR039361 -
Aed6g0702 314 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 160 261 - -
Aed6g0702 314 SMART cyclin_7 102 215 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0702 Aed-Chr6 6168047 6169766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0702 83 245 Core Cell Cycle Gene Families AT1G70210 43.558 1.25e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0702 K18810 - gmx:100781193 395.971