Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0690 ATGAAGAGTATGGAAAATGATGACAGTGTTGACCTTAATAATGAAAACAACAACTGGTTGGGTTTCTCACTCTCTCCTCAAATGAATATAGGAGTTTCTTCTCATTCTCACACACAACCTTCCTCTGCTGCTTCTGAAGTGGTTCCTATTCCTACAAGCTTTTACCACACTGCTCCACTTAATAGCTATGGTTTTTACTATGGACTTGAAGCTGAGAATGTTGGATTGTATTCAGCTTTGCCTATCATGCCTCTCAAATCTGATGGCTCTCTCTATGGAATGGAAGCTCTGAGCAGGTCACACTCACAAGCACAAGCAATGGCTACTGCTTCAACACCAAAACTGGAGAATTTCTTAGGTGGGGAAGCTATGGGGACCCCTCACTATGAATGCAGTAGTGTCACAGAAACAATGCCTCTTAGCTTAGACAGTGTGTTTTACAGCCAACACTCACGCCGTGACACAAATAATAGCAACAACCAAACTTACCAAAACCATATCCAACAGGAGCTTCAAGCCCAACACCACTTGTCATATTACTCTACCATGTTAGAAGGGTCCAAGCAAAGCCAAACCTCAGACAACAACAACAATCTTCAGGTTCAAAACATGGTCGATGATGCTGTTCCTGGTCTGAAGAGTAGTTGGGGAGTGAGGAACAGCTTCCAAGCTAGCCATGCACAAGAGTCATCAAAGATGATTGTTCCTCATGTGGAGGAAAATGGAGGTGAATCAGGGTCCATTGGATCAATGGCTTATGGTGATTTGCAGTCTTTAAGCCTTTCCATGAGTCCTAGCTCACAGTCTAGCTGTGTTACAAGTTCACAAAGAACATCACCTGCTGTCATTGATTCTGTTGCCATGGACACAAAGAAAAGGGGGCCTGAAAAGGTTGACCAGAAGCAAATTGTTCATAGGAAGTCCATTGACACCTTTGGACAAAGAACCTCTCAGTATAGAGGTGTAACAAGGGTGTTTTTGTATCAATCAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGGCAAAGCAGGAAAGGAAGACAAGAGAAAAATTGATGTTTATTCAAGTCATTCCAAACTTTTGATTTTAGGGGGTTATGATATGGAGGAAAAAGCTGCAAGAGCTTATGATCTAGCCGCACTCAAGTATTGGGGACCCTCCACTCACATAAACTTTCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACTAGACAAGAGTATGTTGCTCATTTGAGAAGAAAAAGTAGCGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTAACAAGGTCTCATAGACCAACAACCACTCAACACCACCAACATGGAAGGTGGCAAGCTCGAATTGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGTACACAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATAAAATTCAGAGGAGCAAATGCTGTGACCAACTTTGACATAACAAGATATGATGTGGAGAAGATCATGGCAAGCAGCAACCTTCTCAGCAGTGAGCTAGCTCGGCGCAACCGAGAGACGACAGAGAACAATGGAACTCAGTATATTGATCAAAATCACAACAATAAGCCTAATTCTGCATATGAGGACACTCAAGAAGCCATTCTAATGCAGCAGCAGAAGAGCTGTGGGAGCCAAAATGATCAGTGGAATAAGATGGTTCTCTACCAATCCTCTCAGCAACTTGAGCAGAACCAACCAAGGATTGAGAGTGACAGAACTACTAACCAGTCCTCCTTCTCAGTGGCTTTGGACAACATGTTCCATCAAGAAGTGAAGGAATCGAGTAACAAGGCGAGAACGACGCATGTGTCCAATCCTTCTTCATTGGCCACAAGTTTGAGCAGTTCAAGAGAAGGTAGCCCTGATAAGACAAGCTTGCCAATGCTCTCTGGAATGCCTTCAGCTACTTCTACAAAACTATTGGCTGCTAATCCAAATAGTAACCTCAACGTGAATCCTTGGGACCCTTCACCCCTTTTGAGGCCAGCTCTTACTTTGCCTCAGATGCCAGTTTTTGCTGCCTGGACAGATGCATAG 2115 0.4355 MKSMENDDSVDLNNENNNWLGFSLSPQMNIGVSSHSHTQPSSAASEVVPIPTSFYHTAPLNSYGFYYGLEAENVGLYSALPIMPLKSDGSLYGMEALSRSHSQAQAMATASTPKLENFLGGEAMGTPHYECSSVTETMPLSLDSVFYSQHSRRDTNNSNNQTYQNHIQQELQAQHHLSYYSTMLEGSKQSQTSDNNNNLQVQNMVDDAVPGLKSSWGVRNSFQASHAQESSKMIVPHVEENGGESGSIGSMAYGDLQSLSLSMSPSSQSSCVTSSQRTSPAVIDSVAMDTKKRGPEKVDQKQIVHRKSIDTFGQRTSQYRGVTRVFLYQSGIGGLVDMKLIYGTTAARKRGKAGKEDKRKIDVYSSHSKLLILGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRSHRPTTTQHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDITRYDVEKIMASSNLLSSELARRNRETTENNGTQYIDQNHNNKPNSAYEDTQEAILMQQQKSCGSQNDQWNKMVLYQSSQQLEQNQPRIESDRTTNQSSFSVALDNMFHQEVKESSNKARTTHVSNPSSLATSLSSSREGSPDKTSLPMLSGMPSATSTKLLAANPNSNLNVNPWDPSPLLRPALTLPQMPVFAAWTDA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0690 704 MobiDBLite consensus disorder prediction 530 551 - -
Aed6g0690 704 ProSiteProfiles AP2/ERF domain profile. 318 403 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 CDD AP2 438 507 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 MobiDBLite consensus disorder prediction 617 656 - -
Aed6g0690 704 CDD AP2 317 403 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 Pfam AP2 domain 453 497 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 SUPERFAMILY DNA-binding domain 454 506 IPR016177 GO:0003677
Aed6g0690 704 MobiDBLite consensus disorder prediction 624 656 - -
Aed6g0690 704 ProSiteProfiles AP2/ERF domain profile. 439 505 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 15 702 - -
Aed6g0690 704 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15 702 - -
Aed6g0690 704 Coils Coil 404 424 - -
Aed6g0690 704 SUPERFAMILY DNA-binding domain 366 405 IPR016177 GO:0003677
Aed6g0690 704 SMART rav1_2 318 409 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 SMART rav1_2 439 511 IPR001471 GO:0003700|GO:0006355
Aed6g0690 704 Gene3D AP2/ERF domain 439 507 IPR036955 GO:0003700|GO:0006355
Aed6g0690 704 Gene3D AP2/ERF domain 317 405 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0690 Aed-Chr6 6033010 6037789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0690 637 704 AP2-EREBP Transcription Factor Family AT4G37750 36.709 3.81e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed6g0690 AP2 1.7e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0690 K09285 - gmx:100787611 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1505 11 19347082 19350180 Aed6g0690 6 6033010 6037789 PCT