Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0687 ATGGGAAGGGCTCCTTGCTGTGACAAAGATAATGTCAAGAGAGGTCCATGGTCGCCTGAAGAAGACACCAAACTCAAATCTTACATTCATGAGCATGGCACTGGTGGTAACTGGATAGCCTTGCCTCAGAAAATAGGCCTCAAAAGGTGTGGGAAAAGCTGTCGTCTAAGGTGGCTGAACTATCTTCGGCCAAACATCAAGCACGGAGGTTTCTCAGAAGAAGAAGACAACATCATTTGCAGCCTCTATGTGGTCTATTATAGCAGCACAGTTACCAGGGCGCACAGATAA 291 0.4674 MGRAPCCDKDNVKRGPWSPEEDTKLKSYIHEHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVVYYSSTVTRAHR 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0687 96 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Aed6g0687 96 SUPERFAMILY Homeodomain-like 15 86 IPR009057 -
Aed6g0687 96 Gene3D - 6 68 - -
Aed6g0687 96 PANTHER OS09G0431300 PROTEIN 1 84 - -
Aed6g0687 96 PANTHER OS09G0431300 PROTEIN 1 84 - -
Aed6g0687 96 CDD SANT 16 62 IPR001005 -
Aed6g0687 96 SMART sant 13 64 IPR001005 -
Aed6g0687 96 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aed6g0687 96 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0687 Aed-Chr6 5989044 5989698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0687 1 84 MYB Transcription Factor Family AT3G49690 90.476 5.51e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed6g0687 Myb_DNA-binding 2.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0687 K09422 - gmx:100791406 183.341