Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0677 ATGCGACTCCTTCTCTTCTTCGTCTTCTTCTTCCTCCACTCCCATTTTCACTTGCTCCACTCAGCGCGCGTTTCGGAGTACCGCGCGCTACTCTCTTTCAGAACATCTTCCATAACCGAAGACCCCACCCATGCTCTCTCCTCCTGGAACTCCTCCACCCCGTACTGCTCCTGGTTCGGCGTCACGTGCGACTCTCGCCGCCACGTGACGAGTCTCAACTTAACCTCTCTGTCTCTCTCCGGTACTCTCTCCGACGACCTCTCACACCTTCCGTTCCTCAACCACCTCTCCCTCGCCGACAACATGTTCTCCGGCCCCATCCCATCCGCGCTCTCCGCCCTCTCCGCCCTCCGCGAACTCAACCTCTCCAACAACGTCTTCAACGCCACCTTCCCCTCGCAGCTATCGCGCCTCTCCAACCTCCAAACCCTCGACCTCTACAACAACAACATGACCGGCCCACTCCCCCTCGCCGTCGCCGCCATGCCCCTCCTCCGCCACCTCCACCTCGGCGGCAACTTCTTCTCCGGACAGATCCCCCCGGAGTACGGTACCTGGCAGCACCTCCACTACCTCGCCCTCTCCGGCAACGAGCTCGCCGGCAACATCGCCCCCGAGCTCGGCAACCTCTCCGCCCTCCGCGAGCTCTACATTGGCTACTACAACACCTACTCCGGCGGCCTCCCGCCGCACCTCGGAAACCTCTCCAACCTCGTCCGCCTCGACGCCGCCTACTGCGGCCTTTCCGGCGAGCTTCCGCCGGAGCTCGGAAAACTCCAAAACCTCGACACTCTATTCCTCCAGGTGAACGCCCTCTCCGGCTCCCTCACTCCCTCCCTCGGATCCCTCAAAAGCCTCAAGTCAATGGACCTCTCCAACAACATGCTCTCCGGAGAGGTTCCGGCGAGCTTCGCAGAGCTTAAAAATCTGACTCTCTTAAACCTCTTCCGGAACAAGCTCCACGGCGCCATTCCGGAGTTTGTAGGAGAGTTACCGGCTCTGGAGGTGCTGCAGCTCTGGGAGAACAACTTCACAGGAAGCATTCCTCAGAGTTTAGGTAAAAACGGAAAACTCACTCTTGTTGACCTTTCTTCAAACAAGTTAACGGGGACTCTTCCTCCTAACATGTGTTACGGGAACCGTCTTCAGACTCTTATAACTCTCGGGAACTATCTCTTCGGTCCCATTCCCGATTCGCTTGGAAAGTGCGAGTCTTTGAATAGGATTCGAATGGGAGATAATTTCCTGAACGGTTCTATTCCAAAGGGTCTATTCGGGCTTCCGAAGCTGACTCAGGTTGAGCTTCAGGGTAATCTTCTCACTGGGAAGTTTCCCGAGGAAGATGCTTCCAATCTTGGTCAGATTAGTCTCTCTAACAACAAGCTCTCTGGGCCGTTGCCACCCACCATTGGGAACTTCACCAGCATGCAGAAGCTTCTTCTCGACGGAAACACTTTCACGGGTCGGATTCCACCTCAGATTGGGAGGCTGCAACAGCTTTCCAAGATTGATTTCAGTCATAACAAGCTATCGGGTCCCATTGCTCCTGAGATTAGTCGCTGCAAGCTTCTCACTTTCATTGATCTCAGTGCCAATGCGCTCTCCGGTCAGATTCCCAACCAGATTACTTCCATGCGAATACTCAATTACCTCAACCTTTCCAGAAACCATCTAGATGGGTCTATTCCAGGCTCCATTGCCTCTATGCAGAGTTTGACTTCTGCTGATTTTTCATACAACAATTTCTCTGGCTTGGTTCCTGGCACTGGCCAATTTGGCTACTTCAACTACACCTCTTTCTTGGGAAACCCTGAACTATGTGGTCCTTATTTGGGTCCTTGTAAAGAAGGTGTTGCCAATGGCCCTCGCCAGCCCCACGTTAAAGGTCCCCTCTCTTCTTCATTGAAGCTTTTGTTGGTTATAGGGTTGCTTGTGTGCTCCATTTTGTTCGCCGTCGCGGCGATAATCAAAGCTCGGGCCTTGAAAAAGGCCAATGATGCTAGAGCATGGAAATTAACCGCGTTCCAGCGTCTGGACTTCACTGTTGACGATGTTCTGGATTGCTTGAAGGAGGACAACATAATAGGGAAAGGAGGCGCCGGCATTGTGTACAAAGGAGCAATGCCAAACGCCGACAGCGTCGCTTATGCCTACACCTTGAAAGTTGATGAGAAGAGCGATGTGTACAGCTTCGGGGTGGTTCTTTTGGAGCTTGTAACAGGCAGGAAACCAGTTGGGGAGTTTGGTGATGGTGTGGACATAGTGCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGGTGTTCTAAAAGTTCTTGATCCAAGGCTTCCCTCAGTTCCACTTCATGAGGTGATGCATGTTTTCTATGTAGCCATGCTATGTGTTGAGGAGCAGGCAGTGGAACGGCCAACTATGCGCGAAGTTGTTCAAATTCTGACCGAGCTTCCAAAGCCACCAAGTTCAAAACAAGGAGACTTAACAATCACAGAATCCTCTTTGTCATCATCAGACAACTTAGAGTCTCCAACCACGGCGACGGCATCTAAGGAGGAACCTAAAGATAATCAACATCCTCCCCAGTCGCCACCACCTGATCTTCTTAGCATTTGA 2613 0.5258 MRLLLFFVFFFLHSHFHLLHSARVSEYRALLSFRTSSITEDPTHALSSWNSSTPYCSWFGVTCDSRRHVTSLNLTSLSLSGTLSDDLSHLPFLNHLSLADNMFSGPIPSALSALSALRELNLSNNVFNATFPSQLSRLSNLQTLDLYNNNMTGPLPLAVAAMPLLRHLHLGGNFFSGQIPPEYGTWQHLHYLALSGNELAGNIAPELGNLSALRELYIGYYNTYSGGLPPHLGNLSNLVRLDAAYCGLSGELPPELGKLQNLDTLFLQVNALSGSLTPSLGSLKSLKSMDLSNNMLSGEVPASFAELKNLTLLNLFRNKLHGAIPEFVGELPALEVLQLWENNFTGSIPQSLGKNGKLTLVDLSSNKLTGTLPPNMCYGNRLQTLITLGNYLFGPIPDSLGKCESLNRIRMGDNFLNGSIPKGLFGLPKLTQVELQGNLLTGKFPEEDASNLGQISLSNNKLSGPLPPTIGNFTSMQKLLLDGNTFTGRIPPQIGRLQQLSKIDFSHNKLSGPIAPEISRCKLLTFIDLSANALSGQIPNQITSMRILNYLNLSRNHLDGSIPGSIASMQSLTSADFSYNNFSGLVPGTGQFGYFNYTSFLGNPELCGPYLGPCKEGVANGPRQPHVKGPLSSSLKLLLVIGLLVCSILFAVAAIIKARALKKANDARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNADSVAYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQGDLTITESSLSSSDNLESPTTATASKEEPKDNQHPPQSPPPDLLSI 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0677 870 Gene3D Ribonuclease Inhibitor 330 620 IPR032675 -
Aed6g0677 870 SUPERFAMILY Protein kinase-like (PK-like) 718 817 IPR011009 -
Aed6g0677 870 Gene3D Transferase(Phosphotransferase) domain 1 711 833 - -
Aed6g0677 870 Gene3D Ribonuclease Inhibitor 24 173 IPR032675 -
Aed6g0677 870 Pfam Protein tyrosine and serine/threonine kinase 721 813 IPR001245 GO:0004672|GO:0006468
Aed6g0677 870 SMART LRR_typ_2 356 379 IPR003591 -
Aed6g0677 870 SMART LRR_typ_2 283 306 IPR003591 -
Aed6g0677 870 SMART LRR_typ_2 114 138 IPR003591 -
Aed6g0677 870 SMART LRR_typ_2 331 355 IPR003591 -
Aed6g0677 870 SMART LRR_typ_2 569 592 IPR003591 -
Aed6g0677 870 SMART LRR_typ_2 162 188 IPR003591 -
Aed6g0677 870 SMART LRR_typ_2 497 521 IPR003591 -
Aed6g0677 870 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Aed6g0677 870 MobiDBLite consensus disorder prediction 817 870 - -
Aed6g0677 870 SUPERFAMILY RNI-like 71 392 - -
Aed6g0677 870 SUPERFAMILY L domain-like 356 614 - -
Aed6g0677 870 Gene3D Ribonuclease Inhibitor 264 329 IPR032675 -
Aed6g0677 870 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 716 855 - -
Aed6g0677 870 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 715 - -
Aed6g0677 870 MobiDBLite consensus disorder prediction 817 850 - -
Aed6g0677 870 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 716 855 - -
Aed6g0677 870 Gene3D Ribonuclease Inhibitor 174 263 IPR032675 -
Aed6g0677 870 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 715 - -
Aed6g0677 870 Pfam Leucine rich repeat 261 320 IPR001611 GO:0005515
Aed6g0677 870 Pfam Leucine rich repeat 116 173 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0677 Aed-Chr6 5884736 5889133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0677 716 843 Receptor kinase-like Gene Family AT5G65700 81.538 1.09e-58 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed6g0677 PK_Tyr_Ser-Thr 8.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0677 - - gmx:100499646 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1522 11 19490568 19494109 Aed6g0677 6 5884736 5889133 PCT