Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0668 ATGTCATACCATGGCTGCAGCAGGGATTGGCCTTGTCTCAGTAACCCAGATCCAAAATCAAAAAACCCTAACTCCACTTTATCTCCTCCTTCTTCCACACCCTCAACAACAACAACAACTTGTTGGATGTGGAATCCTAATCCTAATCCTAATCCAAATCCAAATCCAAATCCAAGGGACCATCAGGATCAAGATGAGTCTTGGGAGGTCAGAGCCTTCGCCGAAGATACTAGCAACATCATGGGCACCACCTGGCCCCCTAGGTCCTACTCCTGCACCTTCTGTAGGCGTGAGTTCCGCTCAGCACAAGCCCTCGGCGGCCACATGAACGTGCACCGCCGCGACCGCGCTCGCCTCCACCACCACCACCACAACAACAACCACAACAACATCTCCTCCACTTTTTCTCACTCACAGTACCCTTCTCCTTCTTCAGCACCCTCTTTTCTCAACCGTCAGGACCCTTTTGTTGCAGCAAATGGAGGGTTGTGCCTCTTGTACCCCTTTCCAAGCCCTAACAACAACAACAATGCTTCTCCTTTGATGACTACTCCATTTTCCTCTCTTGCTGGCCACAACAACAACAATAATAATAATAATAATGCATCGTGTGTCTCTTCTTCTTCTTCAGCTTCTTCCCATTATAATTCCCAGCAGTACCCTCCAATGAGGGTGCCTAGTAATTGCTCAGCTACTACTGCTTCCTTTGATTTCTCAGTGGCTCGGCCTCCTCCTCCTGCTATGAGGAGGAACAATGTTTTCTCTTCCTCTTCTCATTCAGGGAAAGTGGATCGGCAAGAACAACCCAAACCCACGGCCTCTTCCACCCGTCTCCACGAGGAGCTTGATCTAGAGCTCCGCTTGGGAAGAAATAGATCAACATCAACCTCATGA 894 0.4911 MSYHGCSRDWPCLSNPDPKSKNPNSTLSPPSSTPSTTTTTCWMWNPNPNPNPNPNPNPRDHQDQDESWEVRAFAEDTSNIMGTTWPPRSYSCTFCRREFRSAQALGGHMNVHRRDRARLHHHHHNNNHNNISSTFSHSQYPSPSSAPSFLNRQDPFVAANGGLCLLYPFPSPNNNNNASPLMTTPFSSLAGHNNNNNNNNNASCVSSSSSASSHYNSQQYPPMRVPSNCSATTASFDFSVARPPPPAMRRNNVFSSSSHSGKVDRQEQPKPTASSTRLHEELDLELRLGRNRSTSTS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0668 297 MobiDBLite consensus disorder prediction 274 288 - -
Aed6g0668 297 MobiDBLite consensus disorder prediction 17 46 - -
Aed6g0668 297 MobiDBLite consensus disorder prediction 240 297 - -
Aed6g0668 297 Gene3D Classic Zinc Finger 80 143 - -
Aed6g0668 297 Pfam C2H2-type zinc finger 90 114 - -
Aed6g0668 297 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Aed6g0668 297 PANTHER OS07G0101800 PROTEIN 43 291 - -
Aed6g0668 297 MobiDBLite consensus disorder prediction 250 273 - -
Aed6g0668 297 PANTHER OS07G0101800 PROTEIN 43 291 - -
Aed6g0668 297 MobiDBLite consensus disorder prediction 189 228 - -
Aed6g0668 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Aed6g0668 297 MobiDBLite consensus disorder prediction 128 151 - -
Aed6g0668 297 MobiDBLite consensus disorder prediction 1 66 - -
Aed6g0668 297 MobiDBLite consensus disorder prediction 122 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0668 Aed-Chr6 5774948 5775851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0668 41 117 C2H2 Transcription Factor Family AT4G17810 67.949 3.10e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0668 - - gmx:102660795 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0668 6 5774948 5775851 Aed6g0668 6 5774948 5775851 ECH
Aed11g1528 11 19541825 19542535 Aed6g0668 6 5774948 5775851 PCT