Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0667 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGCTTTGTTCAAAACCTCCACAGACCGGACTTGCACTTGCAACAGAATTACCAGCAGCATCAGGACCAGCACCACCACCAGCGCGATTCGGAGGAGCAGGAGACTACTCCTCCGAATCACCGCGGAGCGGTGATGGCGCCGTTCGACGATGACGACAGAAGCCAAGGCCTGGAGCTGGCTTCAGGCCCTGGCGACGTCGTCGGACGACGCCCCCGCGGCAGGCCGGCTGGCTCGAAGAACAAGCCCAAGCCGCCGGTGATAATCACCAGAGAGAGCGCCAACACTCTGAGGGCGCATATCCTGGAAGTCGGAAGCGGCTCCGACGTGTTCGACTGCGTGACGAGCTACGCGCGGCGGCGCCAGCGCGGGATCTGCGTCCTCAGCGGCAGCGGCACCGTCACCAATGTAAGCCTCCGGCAGCCTGCGGCTGCCGGAGCCGTGGTGACGCTGCACGGCAGGTTCGAGATTCTCTCCCTCTCCGGCTCGTTCCTCCCGCCGCCGGCTCCGCCGGGAGCCACAAGCCTCACAATCTACCTCGCCGGCGGGCAGGGCCAGGTCGTGGGAGGAAACGTGGTCGGAGAATTAACCGCGGCGGGGCCGGTAATCGTCATCGCAGCATCGTTCACCAACGTGGCTTACGAGAGGCTACCTTTAGAAGAAGAAGAACAACAACAACAGCTTCAGATTCAGCCACCCGCTACGACGTCGTCTAACGGAAACAACAACAACAACAATAACCCTTTCCCTGACCCTTCTTCAGGTCTTCCCTTCTTCAATTTACCACTGAATATGCAGAATGTTCAGTTACCGGTTGAAGGTTGGGCTGGAAATAACACTGCTTCACGTCCACCACCTTTTTAA 891 0.5937 MAGLDLGSASRFVQNLHRPDLHLQQNYQQHQDQHHHQRDSEEQETTPPNHRGAVMAPFDDDDRSQGLELASGPGDVVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGSGSDVFDCVTSYARRRQRGICVLSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQQQQLQIQPPATTSSNGNNNNNNNPFPDPSSGLPFFNLPLNMQNVQLPVEGWAGNNTASRPPPF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0667 296 PIRSF ESCAROLA 12 296 IPR014476 GO:0003680
Aed6g0667 296 MobiDBLite consensus disorder prediction 230 269 - -
Aed6g0667 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 293 IPR014476 GO:0003680
Aed6g0667 296 MobiDBLite consensus disorder prediction 26 96 - -
Aed6g0667 296 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 220 IPR005175 -
Aed6g0667 296 CDD DUF296 107 190 IPR005175 -
Aed6g0667 296 MobiDBLite consensus disorder prediction 232 269 - -
Aed6g0667 296 Gene3D - 106 244 - -
Aed6g0667 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 293 - -
Aed6g0667 296 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 233 - -
Aed6g0667 296 ProSiteProfiles PPC domain profile profile. 103 240 IPR005175 -
Aed6g0667 296 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0667 Aed-Chr6 5709617 5710507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0667 1 293 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 67.434 1.97e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0667 - - pvu:PHAVU_003G230600g 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1529 11 19552554 19553300 Aed6g0667 6 5709617 5710507 PCT