Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0648 ATGGGTTGCTTGCACTCCAAAACCGCACACCTTCACTCTCCTGAAGACCCTCCCACTGCTTTACCAGACTCCAAAAAACCCGATCCAGGGAGTGGTGGGGATGATGCTGATCAAGAGTTTCAGGTTCAGGCATTCAAAGAGTATGGTCTGAGTGAACTTAGAAGGGCCACACATGAGTTCAGCACAGATTACATTGTTTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTCTACAGAGGGAAGCTTGAGAACAATCGCTTAGTTGCTGTGAAACGCTTCTCCAAACTGTCTTGGCCTGATGCTCAACAGTTCATGCAACCATTGCCATGGGAAATGCGTGTCAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGTAGCATGGAAAACCGTAAAATATATCATGATCTGAATGCATATAGGATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTGGCTTATACTCCACCTGAATTTTTGCGTACAGGCAGGATAATCCCAGAGAGTGTGACCTACAGTTATGGAACTGTTCTTCTGGATCTTTTGAGTGGCAAGCATATTCCTCCAAGTCATGCTTTGGACCTAATTAGAGGGAAAAATGTTTTGTTGTTGATGGACTCTTCTCTAGAAGGGCAATATGCAAACGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGAAATTAAGTTTCTTCTTACTGCCGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTGACTAAAAACACAACAGTGCTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAATGGACACAACAAGTGCAAGATATCCTGAACACAAAAAAGTTTGGGGATATTGCATTCAGAGACAAGGATTTCAAAAATGCAATTGAGTATTACTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACTGTATTTGCAAGGAGAGCCTTCTCCTACTTGATGAACGATCAAGCCGAACTTGCATTAAGGGATGCAATGCAGGCACAGGTGTGCATACCGGATTGGCCAACTGCATTCTACTTGCAGGCTCTTGCTCTCTCAAAGCTGGGAATGGAAACTGATGCACTTGACATGCTTAATGATGGGGCTGCCTTTGAAGCAAAGAGGTCTAACAGCTGGCGCGGTTGA 1347 0.435 MGCLHSKTAHLHSPEDPPTALPDSKKPDPGSGGDDADQEFQVQAFKEYGLSELRRATHEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVTYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQFEARERPEIKFLLTAVAPLQKQKEVASHVLMGLTKNTTVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDALDMLNDGAAFEAKRSNSWRG 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0648 448 Gene3D Tetratricopeptide repeat domain 338 447 IPR011990 GO:0005515
Aed6g0648 448 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0648 448 Gene3D Transferase(Phosphotransferase) domain 1 97 284 - -
Aed6g0648 448 Pfam Protein kinase domain 115 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0648 448 SUPERFAMILY Protein kinase-like (PK-like) 65 274 IPR011009 -
Aed6g0648 448 MobiDBLite consensus disorder prediction 1 38 - -
Aed6g0648 448 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 105 - -
Aed6g0648 448 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 106 447 - -
Aed6g0648 448 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 105 IPR045845 GO:0004672|GO:0009742
Aed6g0648 448 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 106 447 IPR045845 GO:0004672|GO:0009742
Aed6g0648 448 SUPERFAMILY TPR-like 339 437 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0648 Aed-Chr6 5534386 5540245 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0648 108 300 Receptor kinase-like Gene Family AT3G58690 32.110 1.31e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aed6g0648 Pkinase 9.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0648 K14500 - gmx:100793576 855.514