Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0610 ATGGAAGAAAGGTATGAGCCATTGAAGGAGCTTGGTGCTGGGAATTTTGGTGTGGCAAGGTTGGCCAAAGATAAGAAAACTGGAGAGCTTGTTGCGGTCAAATACATAGAGAGGGGCAAAAAGATTGATGAAAATGTTCAGAGGGAGATAATTAACCACCGTTCTTTGAGGCATCCAAATATAATCAGGTTCAAAGAGGAAATTTGTCATAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGGAATCCATCTCCACGGCTTAAAATCTGTGACTTTGGTTACTCCAAGTCTGCTCTACTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCCGAGGTTCTGTCGCGAAAGGAGTATGATGGAAAGATTTCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATATCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGGATAATTGGTGTTCAGTACTCCATACCCGACTATGTTCGTGTTTCTTCTGACTGTAGGAATATTCTCTCTCGCATCTTTGTTGCTGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAGCAGAATCCATGGTTTCTGAAGAATTTGCCTAAAGAGATAATTGAAGCAGAAAGAAAGGGATTTGAGGAAACACAGAAAGACCAACCAAGCCAGAAGGTGGAAGAAATAATGAGGATCATACAAGAGGCAAGGGTACCAGGACAAGGATCCAAAGCTGGAGAAGGTGGACATGCTAGCACTACTGGATCATTAGATATTGAGGATGATGAGGAAATTGATGTTAGTGGTGACTATGAACATGTGTAA 858 0.4172 MEERYEPLKELGAGNFGVARLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEEICHRDLKLENTLLDGNPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSSDCRNILSRIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGFEETQKDQPSQKVEEIMRIIQEARVPGQGSKAGEGGHASTTGSLDIEDDEEIDVSGDYEHV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0610 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Aed6g0610 285 SUPERFAMILY Protein kinase-like (PK-like) 3 217 IPR011009 -
Aed6g0610 285 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Aed6g0610 285 PANTHER SERINE/THREONINE KINASE 67 279 - -
Aed6g0610 285 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0610 285 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 67 279 - -
Aed6g0610 285 Pfam Protein kinase domain 65 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0610 285 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 66 - -
Aed6g0610 285 Gene3D Phosphorylase Kinase; domain 1 1 69 - -
Aed6g0610 285 PANTHER SERINE/THREONINE KINASE 3 66 - -
Aed6g0610 285 SMART serkin_6 5 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0610 285 Gene3D Transferase(Phosphotransferase) domain 1 70 255 - -
Aed6g0610 285 MobiDBLite consensus disorder prediction 247 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0610 Aed-Chr6 5189544 5193117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0610 4 213 CBL-interacting serine-threonine protein kinases AT5G25110 34.926 1.00e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aed6g0610 Pkinase 9.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0610 K14498 - gmx:100782714 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0610 6 5189544 5193117 Aed6g0610 6 5189544 5193117 ECH