Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed6g0598 | ATGGAACCAAGTTTTAAGCACCAACCTGGGCTTGTTTGTGTGATATTGCTCTTCCCTGCACTGTGTAGCTGCAACCAGTACTTTACGAACTCCAGAGCAAGCTATTATAATACCCCTGATGCCCTTGGAAATCCAAGTGGAGCTTGTGGCTTTGAAGAATATGGAAGAACGATTAATAATGGCAGTGTAGCAGCCGTATCAGGAATATGGAGGGATGGAGCTGGCTGTGGCACATGTTATTGGGTACGCTGCAAAATTCCACAATACTGCGGGAAAGGAGTGCAGGTGGTGGCGACAGACCATGGTTCAGGAGACAGAACAGACTTCATAATGAGCAAACGTGGATTCTCAGGATTGGCACGCAACGAAGCTGCTTCTAAAGAGCTTTTCAAACGCGGGGTGGTGGATATTGCATTCACTAGGGTTCCCTGTAACTACCCTGGTAACATTAAGCTCCGTGTCCAGAAGAGCAGCAAAAACCCTGGCTATTTTGCTAGAGGGCAGAAACGATGGGAGCCATTACGCAGGGTTTATGGGGCAGTATTTGACTATGCAAACCCACCTAGTGGTGCAATTCTGTTGAGGTTTCAAGTTGACTATAGATATTGGCTGCATTCAAATAATCCTATCCCTGCTAATTGGAAGTATGAAGCTACTTATGATACCAAAGTTCAGATTTATTAG | 684 | 0.4547 | MEPSFKHQPGLVCVILLFPALCSCNQYFTNSRASYYNTPDALGNPSGACGFEEYGRTINNGSVAAVSGIWRDGAGCGTCYWVRCKIPQYCGKGVQVVATDHGSGDRTDFIMSKRGFSGLARNEAASKELFKRGVVDIAFTRVPCNYPGNIKLRVQKSSKNPGYFARGQKRWEPLRRVYGAVFDYANPPSGAILLRFQVDYRYWLHSNNPIPANWKYEATYDTKVQIY | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed6g0598 | 227 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | - | - | |
Aed6g0598 | 227 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 46 | 149 | IPR007112 | - | |
Aed6g0598 | 227 | Gene3D | - | 20 | 145 | IPR036908 | - | |
Aed6g0598 | 227 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 152 | 222 | IPR007117 | - | |
Aed6g0598 | 227 | PANTHER | EXPANSIN-B1-LIKE PROTEIN | 4 | 226 | - | - | |
Aed6g0598 | 227 | SUPERFAMILY | Barwin-like endoglucanases | 14 | 149 | IPR036908 | - | |
Aed6g0598 | 227 | Gene3D | - | 165 | 227 | IPR036749 | - | |
Aed6g0598 | 227 | PRINTS | Expansin/Lol pI family signature | 27 | 42 | IPR007118 | GO:0005576 | |
Aed6g0598 | 227 | PRINTS | Expansin/Lol pI family signature | 132 | 148 | IPR007118 | GO:0005576 | |
Aed6g0598 | 227 | PRINTS | Expansin/Lol pI family signature | 66 | 84 | IPR007118 | GO:0005576 | |
Aed6g0598 | 227 | SUPERFAMILY | PHL pollen allergen | 148 | 222 | IPR036749 | - | |
Aed6g0598 | 227 | PANTHER | EXPANSIN-B3 | 4 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed6g0598 | Aed-Chr6 | 5058758 | 5060219 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed6g0598 | 11 | 226 | Expansin Gene Family | AT4G17030 | 43.568 | 1.29e-60 | 189 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed6g0598 | - | - | gmx:100776296 | 424.091 |