Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0596 ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTCTGGCGTAATGGGCCACCTGAGAAGCCAGTACTATGCAATGCATGTGGATCTCGATGGAGGACAAAGGGAACACTTGCAAATTATACCCCTTTGCACGCTCGGGCAGAAACTGTTGAATATGAGGATCAAAAGATTTCTAGGGTGAAGAGCATATCATTAAATAAGAACAAAGAAGTGAAATTGGTCAAGCGAAAGCAGAATTATGATAATGATGCATCTGGAGGGTTTGTTCCTGATTATAATCAAGGATACCGAAAGGTTGTGGATGAAGATACAAGCAATAGATCAAGCTCAGGGTCAGCTGTCTCTAACTCAGAGAGCTGTGTTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGTGCAGGTCGTCCAAAGCCTTCATCTGTTGAGAAGCTCACACGAGACCTGTGTACTATTCTTCATGAACAACAGTCTTGTTTTTCTGCATCTTCTGAAGAGGATCTTCTTTTTGATAGTGATACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCTATAGCTCGTGATGAAGAGTCCGAAGCTAGCTCTCTCTCAGTTGATAATAAACAATGCCTAATGAATGAATCTCATTCATTTTCTAGTACCATTCCTATTTATAGTGATCGCATTGGCATGAACTTCTCATCTCATGGAGTTGTAAAGATCAAAAACTCAGCTGGCCAAATCATGCAACAAGAGAAACTTGAAAGGCATGTTTTCCCACACCAGGACAAGCCTCAACTTGAAAAACTACAAGTTCCTGGAAATCATGATTCACCACTGTGCTCAATTGATTTAAATGATGTAGTCAACTACGAGGAGTTTATGAGAAACTTGACAAGTGAAGAGCAGCAGCAATTACTGAAGTATCTCCCAGTGGTTGATACTGCTAAATTTCCTGATAGCCTTAGAAACATGTTCAATAGCTTCCAATTCAAGGAGAACTTAACTTATTTTCAGCAACTTCTCGGGGAAGGTGTCTTTGGCATCTCTTCGTTGGGGGCAAAACCTGAAGAATGGAAGACATTAAAAAGGCTTGTGTTATCTAATCTGTCAAAGTCAAAATGGGTAGAACACTATAATTTCCTCAAGAAATGTGAAAACAAATCTGGAAAATCTATTGGTTCGGGATCCACTGCGAAGGAATCAAGTAATGTTAAAAATGCCAAGAGAATACGTGAGCATGACAGCCAAAATCAAAATTTTCCAGAATTGAAGACAACAATGAGGAGCCCCAAAAGGGTGATCATAATAAAGCCTAGCTACGAGGGCAAAGAAGTTGTAGAAGAAGGCTCTAGCTTCAGTCCAAAAAGCCTCTTTGCTTTACCCCATGGTGTTGGCGGCTTGCACATGCTGGATTCTTGCAACTTTGTTGGCGAGAGTTCCGAGGATTTGCTGTTAGAGGTGCCATCTAACGGTTCTTTTCCTCAGGCGGAGCTCCTGCACCCGTCTTTAAGCTACGGTGCTCCTCAGGTCAGCACCACCACTAGTAGCTCGGTACACTTGCCTATTACTCATCCTTAA 1656 0.4263 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETVEYEDQKISRVKSISLNKNKEVKLVKRKQNYDNDASGGFVPDYNQGYRKVVDEDTSNRSSSGSAVSNSESCVQFGGTDASDLTGPAQSVVWDAMVPSKKRTCAGRPKPSSVEKLTRDLCTILHEQQSCFSASSEEDLLFDSDTPMVSVEIGHGSILIRHPSSIARDEESEASSLSVDNKQCLMNESHSFSSTIPIYSDRIGMNFSSHGVVKIKNSAGQIMQQEKLERHVFPHQDKPQLEKLQVPGNHDSPLCSIDLNDVVNYEEFMRNLTSEEQQQLLKYLPVVDTAKFPDSLRNMFNSFQFKENLTYFQQLLGEGVFGISSLGAKPEEWKTLKRLVLSNLSKSKWVEHYNFLKKCENKSGKSIGSGSTAKESSNVKNAKRIREHDSQNQNFPELKTTMRSPKRVIIIKPSYEGKEVVEEGSSFSPKSLFALPHGVGGLHMLDSCNFVGESSEDLLLEVPSNGSFPQAELLHPSLSYGAPQVSTTTSSSVHLPITHP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0596 551 Gene3D - 291 398 IPR038108 -
Aed6g0596 551 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 46 - -
Aed6g0596 551 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 301 413 IPR044867 -
Aed6g0596 551 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Aed6g0596 551 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 551 - -
Aed6g0596 551 PANTHER OSJNBB0038F03.10 PROTEIN 1 551 IPR044589 -
Aed6g0596 551 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Aed6g0596 551 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Aed6g0596 551 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Aed6g0596 551 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Aed6g0596 551 Pfam Asx homology domain 296 373 IPR028020 -
Aed6g0596 551 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0596 Aed-Chr6 5047353 5053566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0596 1 526 C2C2-Gata Transcription Factor Family AT4G17570 52.710 3.60e-159 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aed6g0596 ASXH 6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0596 - - gmx:100775750 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1580 11 19932156 19938139 Aed6g0596 6 5047353 5053566 PCT