Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0586 ATGTACGGACAGAGTAGTAGCTACGAGTCGGACTTGGCGCTCTTGGAATCAATTCGGCGCCACTTGCTGGGGGAGTCCGAAACGATATTCGAAGCCCCGAGTTGTGGTTCGGGTCGGAGCTCCAGTTTCAGCAGCTTGGACTCCTGTTTGAGCCACAATTGGGGCGAGCTTCCGTTTAAGGAGGACGATTCCGAGGACATGGTGCTGTACGGCGTTCTCCGCGACGCCGTTAATGTCGGCTGGGTCCCGTCTCTTGATGCCGGGTCACCGGAGAGTGTATCGTCGGGTTTTCCGGCGGAGATTGCGGTCAAGCAGGAGTTGGATGTCATGCCGGCGGTGAATATGATTAGTGCGCCACCAGTGGTGGTGGCGGAGAAGAAGGTTGTTCCGGCGAAGGGGAAGCACTACCGCGGCGTGAGGCAGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGGCGAAAAACGGGGCGCGGGTTTGGCTCGGAACTTTTGAGACGGCAGAGGACGCGGCGTTGGCGTACGACCGCGCCGCCTACCGGATGCGGGGGTCGAGGGCGTTGCTGAATTTTCCGTTGAGGGTTAACTCCGGGGAGCCCGACCCGGTGAGGGTGACGTCGAAGAGGTCGTCGTCGCCAGAGAATACTTCAGCGGCGCCGGCGAAGAGGAAGAAAGTGGTGGTGGGGACGGGGCAAGTGCAAGTGGGAAGTCAAGTGGCAGAGTGTACACGTGTCGATCAGTTATTGATTAGTTGA 759 0.6021 MYGQSSSYESDLALLESIRRHLLGESETIFEAPSCGSGRSSSFSSLDSCLSHNWGELPFKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSPESVSSGFPAEIAVKQELDVMPAVNMISAPPVVVAEKKVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSPENTSAAPAKRKKVVVGTGQVQVGSQVAECTRVDQLLIS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0586 252 PANTHER BNAANNG21280D PROTEIN 30 240 - -
Aed6g0586 252 PRINTS Ethylene responsive element binding protein signature 159 175 IPR001471 GO:0003700|GO:0006355
Aed6g0586 252 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Aed6g0586 252 ProSiteProfiles AP2/ERF domain profile. 135 193 IPR001471 GO:0003700|GO:0006355
Aed6g0586 252 CDD AP2 134 193 IPR001471 GO:0003700|GO:0006355
Aed6g0586 252 MobiDBLite consensus disorder prediction 200 225 - -
Aed6g0586 252 Pfam AP2 domain 135 185 IPR001471 GO:0003700|GO:0006355
Aed6g0586 252 PANTHER DNA-BINDING DOMAIN 30 240 IPR044808 GO:0003700|GO:0009873
Aed6g0586 252 MobiDBLite consensus disorder prediction 204 219 - -
Aed6g0586 252 SUPERFAMILY DNA-binding domain 135 195 IPR016177 GO:0003677
Aed6g0586 252 Gene3D AP2/ERF domain 134 196 IPR036955 GO:0003700|GO:0006355
Aed6g0586 252 SMART rav1_2 135 199 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0586 Aed-Chr6 4959831 4960589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0586 9 251 AP2-EREBP Transcription Factor Family AT4G17500 53.091 2.80e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed6g0586 AP2 9.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0586 K09286 - gmx:100817097 373.244