Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0585 ATGGCGAACGCAGCTGAAGTATCAGCCTTGAACCGCATCAAGTTGCATCTTTTGGGTGAGCTCTCTCCACTGGCCACTCCCCAAAAGAGATTCGATGAAACAAACCATAGCCCCTCTGAGTCTGAGTCTTCTTCAGATTCTGGTTCATCTTCGATTTCTCTCAACCATTACTTCACTGAGATACTCGAACCTGAGTTTCAGTTTCCTCAAATAATCGACCTCGAGACCCCGAAAACCCTAACTTCGGTTGAGAAGAAGACTCGTAAACCTTCGCTGCAAATCTCTGTACCGAAGAAGACCGAGTGGATCCAGTTCGGGAAACCGGATCCGAACCCGGAGGTGGTGGTTGCGCCGCCGGCGGAGAAGAAGCACTATAGAGGAGTCCGGCAGAGGCCGTGGGGGAAGTTCGCCGCCGAGATCCGCGACCCGAACAAGCGCGGGTCTAGGGTTTGGCTCGGAACCTTCGACACCGCCGTTGAAGCCGCCAAGGCCTACGACAGAGCCGCCTTCAGACTCCGTGGCTCCAAGGCCATCCTCAACTTCCCCCTCGAAATCTGCGCCGCGGAGGAGACCTCCTCTACCGCCGTCGCCGTATGCGACGGAGAGAGGAAGCGCCGCCGCGAGGAGGAGGTGGTAGTGGTGGTGGAGGAGGAAGTAAAGCAGCCGGTGGTGAAGAAGGAGAAAATAACGGAACATGATGTGAACTGTTTTAGGGAGATGCCCTTAACGCCGTCTATGTGGACCGGGTTCTGGGAAAGTGACGTTAAGGATATCTTCAACGTTCCGCCGTTGTCGCCGTTATCTCCTTTTGGATTTTCACCGCTCGTGGTTGTGTGA 837 0.5496 MANAAEVSALNRIKLHLLGELSPLATPQKRFDETNHSPSESESSSDSGSSSISLNHYFTEILEPEFQFPQIIDLETPKTLTSVEKKTRKPSLQISVPKKTEWIQFGKPDPNPEVVVAPPAEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAVEAAKAYDRAAFRLRGSKAILNFPLEICAAEETSSTAVAVCDGERKRRREEEVVVVVEEEVKQPVVKKEKITEHDVNCFREMPLTPSMWTGFWESDVKDIFNVPPLSPLSPFGFSPLVVV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0585 278 SMART rav1_2 124 188 IPR001471 GO:0003700|GO:0006355
Aed6g0585 278 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 265 - -
Aed6g0585 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 4 265 - -
Aed6g0585 278 MobiDBLite consensus disorder prediction 24 51 - -
Aed6g0585 278 SUPERFAMILY DNA-binding domain 124 184 IPR016177 GO:0003677
Aed6g0585 278 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Aed6g0585 278 Gene3D AP2/ERF domain 123 184 IPR036955 GO:0003700|GO:0006355
Aed6g0585 278 CDD AP2 123 182 IPR001471 GO:0003700|GO:0006355
Aed6g0585 278 PRINTS Ethylene responsive element binding protein signature 148 164 IPR001471 GO:0003700|GO:0006355
Aed6g0585 278 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Aed6g0585 278 ProSiteProfiles AP2/ERF domain profile. 124 182 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0585 Aed-Chr6 4945678 4946514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0585 1 278 AP2-EREBP Transcription Factor Family AT5G47230 44.728 1.15e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed6g0585 AP2 1.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0585 K09286 - gmx:100800453 365.54